RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TUBP50607 506 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 UBAP2LQ14157 1087 aaKnown RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 ZIK1Q3SY52 487 aaPredicted RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 CPB2Q96IY4 423 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 MRPL57Q9BQC6 102 aaKnown RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 FAM126AQ9BYI3 521 aaPredicted RBP13.21□□□□□ -0.29
RNF43-208ENST00000584437 IKZF3Q9UKT9 509 aa13.21□□□□□ -0.29
RNF43-208ENST00000584437 CCDC162PA2VCL2 907 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 RCCD1A6NED2 376 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 TBX4P57082 545 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 LGALS3BPQ08380 585 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 GLT6D1Q7Z4J2 308 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 POLNQ7Z5Q5 900 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 AKAP14Q86UN6 197 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 OFCC1Q8IZS5 231 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 LNX1Q8TBB1 728 aaPredicted RBP13.21□□□□□ -0.3
RNF43-208ENST00000584437 PPP3R2Q96LZ3 170 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 ZCCHC2Q9C0B9 1178 aaKnown RBP13.21□□□□□ -0.3
RNF43-208ENST00000584437 KCNQ5Q9NR82 932 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.3
RNF43-208ENST00000584437 ZMYM5Q9UJ78 669 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 CORO2BQ9UQ03 480 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 SLIT1O75093 1534 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 A0A0U1RQJ8 604 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 TMCC2O75069 709 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 COX7A2P14406 83 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 GLRA2P23416 452 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 CHKAP35790 457 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 LIPMQ5VYY2 423 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 ARHGAP36Q6ZRI8 547 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 BBS12Q6ZW61 710 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 FAM71AQ8IYT1 594 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 RCN3Q96D15 328 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 MTMR9Q96QG7 549 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 MYOZ2Q9NPC6 264 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 SLCO1B3Q9NPD5 702 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 RNF181Q9P0P0 153 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.3
RNF43-208ENST00000584437 IFRD1O00458 451 aaPredicted RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 GSC2O15499 205 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 CYP2C18P33260 490 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 LPIN1Q14693 890 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 UNC5AQ6ZN44 842 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 PROSER1Q86XN7 944 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 HIPK1Q86Z02 1210 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 DNERQ8NFT8 737 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 EBNA1BP2Q99848 306 aaKnown RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 ACE2Q9BYF1 805 aaPredicted RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 TBC1D30Q9Y2I9 924 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 TGFB3P10600 412 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 DGKAP23743 735 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 RCVRNP35243 200 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 SMIM11AP58511 58 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 MAPKAPK3Q16644 382 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 CTXN3Q4LDR2 81 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 ZNF513Q8N8E2 541 aaPredicted RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 SMARCD1Q96GM5 515 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 SERAC1Q96JX3 654 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 RPRD1BQ9NQG5 326 aaKnown RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 CATSPERZQ9NTU4 200 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 CMTM6Q9NX76 183 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 ING3Q9NXR8 418 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 TAS2R14Q9NYV8 317 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 CNTNAP4Q9C0A0 1308 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 A0A087WZ62 844 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 SHOX2O60902 331 aaPredicted RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 ZMPSTE24O75844 475 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 ETS2P15036 469 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 CHRNA5P30532 468 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 ALDH7A1P49419 539 aaKnown RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 GNA13Q14344 377 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 ANGEL2Q5VTE6 544 aaKnown RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 MED8Q96G25 268 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 ALG9Q9H6U8 611 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 POPDC2Q9HBU9 364 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 S100A14Q9HCY8 104 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 SEMA4BQ9NPR2 832 aaPredicted RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 VPS45Q9NRW7 570 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 RBAK-RBAKDNI3L0D1 243 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 PTPN3P26045 913 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 BNIP1Q12981 228 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 LIN52Q52LA3 116 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 SCUBE3Q8IX30 993 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 QRFPRQ96P65 431 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 VPS51Q9UID3 782 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 RAB26Q9ULW5 256 aa13.2□□□□□ -0.3
RNF43-208ENST00000584437 WBP11Q9Y2W2 641 aaKnown RBP13.2□□□□□ -0.3
RNF43-208ENST00000584437 BBIP1A8MTZ0 92 aa13.19□□□□□ -0.3
RNF43-208ENST00000584437 ACKR2O00590 384 aa13.19□□□□□ -0.3
RNF43-208ENST00000584437 HOXA2O43364 376 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms