RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SLC6A3Q01959 620 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 NME3Q13232 169 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 AUHQ13825 339 aaKnown RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 EFHC1Q5JVL4 640 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 RABGAP1LQ5R372 815 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3GQ6DHY5 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3CQ6IPX1 549 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 OLFML1Q6UWY5 402 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 C14orf80Q86SX3 495 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 XYLT1Q86Y38 959 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 TBC1D3Q8IZP1 549 aaPredicted RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 PDCD7Q8N8D1 485 aaKnown RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 PIP4K2CQ8TBX8 421 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 NXPE2Q96DL1 559 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 ABHD10Q9NUJ1 306 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 PCDHGA1Q9Y5H4 931 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 HS3ST4Q9Y661 456 aa16.05■□□□□ 0.16
SKA2-209ENST00000583976 BZW2Q9Y6E2 419 aaKnown RBP16.05■□□□□ 0.16
SKA2-209ENST00000583976 A0A087WV48 116 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 TLX3O43711 291 aaPredicted RBP16.04■□□□□ 0.16
SKA2-209ENST00000583976 CTSLP07711 333 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 PRLRP16471 622 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 MMP8P22894 467 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 ITPKBP27987 946 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 CCR1P32246 355 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 TAS2R38P59533 333 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 CDK17Q00537 523 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 SFSWAPQ12872 951 aaKnown RBP16.04■□□□□ 0.16
SKA2-209ENST00000583976 ACCSLQ4AC99 568 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 FAM102AQ5T9C2 384 aaPredicted RBP16.04■□□□□ 0.16
SKA2-209ENST00000583976 TTC39BQ5VTQ0 682 aaPredicted RBP16.04■□□□□ 0.16
SKA2-209ENST00000583976 ACAD10Q6JQN1 1059 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 WDR59Q6PJI9 974 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 TMPRSS12Q86WS5 348 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 CNGA4Q8IV77 575 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 OR8D1Q8WZ84 308 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 TSC1Q92574 1164 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 RNF34Q969K3 372 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 SKA1Q96BD8 255 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 DNAJC7Q99615 494 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 FZD3Q9NPG1 666 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
SKA2-209ENST00000583976 ZNHIT6Q9NWK9 470 aaKnown RBP16.04■□□□□ 0.16
SKA2-209ENST00000583976 ADAM22Q9P0K1 906 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 SLC25A13Q9UJS0 675 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 VPS28Q9UK41 221 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 OR51B4Q9Y5P0 310 aa16.04■□□□□ 0.16
SKA2-209ENST00000583976 YKT6O15498 198 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 ATP9BO43861 1147 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 SNAP91O60641 907 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 HSF2BPO75031 334 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 PAGE1O75459 146 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 DAB1O75553 588 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 CNTN5O94779 1100 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 ARRB1P49407 418 aaPredicted RBP16.03■□□□□ 0.16
SKA2-209ENST00000583976 PLK1P53350 603 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 TARDBPQ13148 414 aaKnown RBP eCLIP16.03■□□□□ 0.16
SKA2-209ENST00000583976 SLC12A1Q13621 1099 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 DLG2Q15700 870 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 FBXL19Q6PCT2 694 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 ZDHHC17Q8IUH5 632 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 SPC24Q8NBT2 197 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 KLK6Q92876 244 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 PSMB7Q99436 277 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 FEM1AQ9BSK4 669 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 TMPRSS4Q9NRS4 437 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 PIGVQ9NUD9 493 aa16.03■□□□□ 0.16
SKA2-209ENST00000583976 PTPRQQ9UMZ3 2332 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 GOLGA6L3A6NEY3 463 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 C1QTNF3-AMACRE9PGA6 284 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 K7ERQ8 282 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 KALRNO60229 2985 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 GJB6O95452 261 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 MT-CO1P00395 513 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 CALB1P05937 261 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 SRCP12931 536 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 JUPP14923 745 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 HNRNPH3P31942 346 aaKnown RBP16.02■□□□□ 0.16
SKA2-209ENST00000583976 HNF1BP35680 557 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 EIF4A3P38919 411 aaKnown RBP16.02■□□□□ 0.16
SKA2-209ENST00000583976 NNMTP40261 264 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 ABCG1P45844 678 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 SEMG2Q02383 582 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 SULT2A1Q06520 285 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 ALFQ53S48 1182 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 SLC45A4Q5BKX6 768 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 PIP5KL1Q5T9C9 394 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 MON1BQ7L1V2 547 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 SLC26A9Q7LBE3 791 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 PRPF39Q86UA1 669 aaKnown RBP16.02■□□□□ 0.16
SKA2-209ENST00000583976 VPS36Q86VN1 386 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 TRIM69Q86WT6 500 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 PHF13Q86YI8 300 aaPredicted RBP16.02■□□□□ 0.16
SKA2-209ENST00000583976 SH2D3CQ8N5H7 860 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 TC2NQ8N9U0 490 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 MFSD2AQ8NA29 543 aa16.02■□□□□ 0.16
SKA2-209ENST00000583976 CHP1Q99653 195 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms