RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 FBRSL1Q9HCM7 1045 aaKnown RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 MAGED2Q9UNF1 606 aaPredicted RBP10.61□□□□□ -0.71
SS18-221ENST00000582448 COL4A2P08572 1712 aa10.61□□□□□ -0.71
SS18-221ENST00000582448 CCDC163A0A0D9SF12 145 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 TARSL2A2RTX5 802 aaKnown RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 OTOL1A6NHN0 477 aaPredicted RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 CCDC188H7C350 402 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 O00370 1275 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 CYB561D2O14569 222 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 PROSCO94903 275 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 RHOXF2BP0C7M4 288 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 ODC1P11926 461 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 TYMPP19971 482 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 WARSP23381 471 aaKnown RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 CTNNA2P26232 953 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 MAN1A1P33908 653 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 AVPR1AP37288 418 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 CD96P40200 585 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 LHX1P48742 406 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 TUFMP49411 452 aaKnown RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 PSMC1P62191 440 aaKnown RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 PIGHQ14442 188 aaPredicted RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 ZNF268Q14587 947 aaPredicted RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 LONRF2Q1L5Z9 754 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 SOWAHAQ2M3V2 549 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 GOLGA7BQ2TAP0 167 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 UAP1L1Q3KQV9 507 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 NAIF1Q69YI7 327 aaPredicted RBP10.6□□□□□ -0.71
SS18-221ENST00000582448 C8orf74Q6P047 294 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 ACOT1Q86TX2 421 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 RHOT1Q8IXI2 618 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 CMTM8Q8IZV2 173 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 PDCL2Q8N4E4 241 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 MMGT1Q8N4V1 131 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 LRRN4CLQ8ND94 238 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 PHC3Q8NDX5 983 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 OR10T2Q8NGX3 314 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 RPLP0P6Q8NHW5 317 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 MAIP1Q8WWC4 291 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 CRELD1Q96HD1 420 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 TWNKQ96RR1 684 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 HPS4Q9NQG7 708 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 ST7Q9NRC1 585 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 HMGXB4Q9UGU5 601 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 TSPAN16Q9UKR8 245 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 DSEQ9UL01 958 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 CCL26Q9Y258 94 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 SLC5A6Q9Y289 635 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 ATG2BQ96BY7 2078 aa10.6□□□□□ -0.71
SS18-221ENST00000582448 GOLGA8SH3BPF8 625 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 KRIT1O00522 736 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 TRDMT1O14717 391 aaKnown RBP10.59□□□□□ -0.71
SS18-221ENST00000582448 LRIG2O94898 1065 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 SLITRK5O94991 958 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 CEACAM5P06731 702 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 KRT3P12035 628 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 ITIH2P19823 946 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 CTNNA1P35221 906 aaKnown RBP10.59□□□□□ -0.71
SS18-221ENST00000582448 AARSP49588 968 aaKnown RBP eCLIP10.59□□□□□ -0.71
SS18-221ENST00000582448 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 PDCLQ13371 301 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 MAP9Q49MG5 647 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 ZFYVE27Q5T4F4 411 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 ARHGAP17Q68EM7 881 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 TXNDC8Q6A555 127 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 TMCO3Q6UWJ1 677 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 ZDHHC17Q8IUH5 632 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 CRYBG2Q8N1P7 616 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 THEM5Q8N1Q8 247 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 RASGEF1CQ8N431 466 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 STKLD1Q8NE28 680 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 SPATA18Q8TC71 538 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 ZC3H10Q96K80 434 aaKnown RBP10.59□□□□□ -0.71
SS18-221ENST00000582448 MCEEQ96PE7 176 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 P2RY13Q9BPV8 354 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 MIR1-1HGQ9H1L0 117 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 VTI1BQ9UEU0 232 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 CHORDC1Q9UHD1 332 aaPredicted RBP10.59□□□□□ -0.71
SS18-221ENST00000582448 TTC7AQ9ULT0 858 aaPredicted RBP10.59□□□□□ -0.71
SS18-221ENST00000582448 L1RE1Q9UN81 338 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 PCDHA3Q9Y5H8 950 aa10.59□□□□□ -0.71
SS18-221ENST00000582448 PDCD11Q14690 1871 aaKnown RBP10.59□□□□□ -0.71
SS18-221ENST00000582448 CNOT1A5YKK6 2376 aaKnown RBP10.59□□□□□ -0.71
SS18-221ENST00000582448 BCLAF3A2AJT9 711 aaKnown RBP10.58□□□□□ -0.72
SS18-221ENST00000582448 TMEM191CA6NGB0 347 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 SIGLEC16A6NMB1 481 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 PSTPIP1O43586 416 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 APBB3O95704 486 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 FGGP02679 453 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 PDGFRBP09619 1106 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 ATF6P18850 670 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 DRD1P21728 446 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 PCSK1P29120 753 aa10.58□□□□□ -0.72
SS18-221ENST00000582448 GPD2P43304 727 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms