RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	TBC1D3K	A0A087X1G2	549 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708		A0A1B0GVT2	93 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FAM170A	A1A519	330 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FAM47DP	A6NHR8	397 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3L	B9A6J9	549 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	YKT6	O15498	198 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FLRT2	O43155	660 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PCDHGA12	O60330	932 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	MAGEC1	O60732	1142 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RAMP2	O60895	175 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RNF8	O76064	485 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	GJB6	O95452	261 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FTL	P02792	175 aa	Predicted RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TPM3	P06753	285 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3H	P0C7X1	549 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	KCNA4	P22459	653 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	C21orf59	P57076	290 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	BNC1	Q01954	994 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	POLD3	Q15054	466 aa	Predicted RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZNF423	Q2M1K9	1284 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	KIF19	Q2TAC6	998 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	PARP15	Q460N3	678 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	AGBL4	Q5VU57	503 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3G	Q6DHY5	549 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3C	Q6IPX1	549 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SCYL2	Q6P3W7	929 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TMC6	Q7Z403	805 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ADAT2	Q7Z6V5	191 aa	Known RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	GLRX5	Q86SX6	157 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	LUZP1	Q86V48	1076 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RTL3	Q8N8U3	475 aa	Known RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	DEFB124	Q8NES8	71 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ARHGEF2	Q92974	986 aa	Known RBP	12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ISCU	Q9H1K1	167 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	DYRK4	Q9NR20	520 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TM7SF3	Q9NS93	570 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	IL36A	Q9UHA7	158 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SARDH	Q9UL12	918 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FZD10	Q9ULW2	581 aa		12.85	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TMEM191C	A6NGB0	347 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FAM72C	H0Y354	149 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708		K7ERQ8	282 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	DDX3X	O00571	662 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	1e-8	■■■□□ 15.4
CDK5RAP3-222	ENST00000581708	GIPC1	O14908	333 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SMAD6	O43541	496 aa	Known RBP	12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	KDELR3	O43731	214 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	GSR	P00390	522 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CD38	P28907	300 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	EPHB2	P29323	1055 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CTSK	P43235	329 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ARF5	P84085	180 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZBED6	P86452	979 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CNTN1	Q12860	1018 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	INAVA	Q3KP66	663 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ZSCAN23	Q3MJ62	389 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	SETMAR	Q53H47	684 aa	Predicted RBP	12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RAB6C	Q53S08	254 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	INO80D	Q53TQ3	878 aa	Predicted RBP	12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CARD16	Q5EG05	197 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FAM72A	Q5TYM5	149 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	NAPEPLD	Q6IQ20	393 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FAM72D	Q6L9T8	149 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	LINGO4	Q6UY18	593 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FAM72B	Q86X60	149 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	NAXD	Q8IW45	347 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	UMODL1-AS1	Q8N2C9	162 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	OXR1	Q8N573	874 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	MFSD2A	Q8NA29	543 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	FAM174A	Q8TBP5	190 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CDC6	Q99741	560 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	HEPH	Q9BQS7	1158 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	RAB6C	Q9H0N0	254 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	ERVMER34-1	Q9H9K5	563 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	TAS2R14	Q9NYV8	317 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CAPN11	Q9UMQ6	739 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	CABIN1	Q9Y6J0	2220 aa		12.84	□□□□□ -0.35
CDK5RAP3-222	ENST00000581708	KPNA3	O00505	521 aa	Predicted RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ZNF821	O75541	412 aa	Predicted RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SERPING1	P05155	500 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CTSL	P07711	333 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	GLDC	P23378	1020 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PSMA2	P25787	234 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ITGB7	P26010	798 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CCT8	P50990	548 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	NDST2	P52849	883 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SNRPD1	P62314	119 aa	Known RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SIM1	P81133	766 aa	Predicted RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ERMARD	Q5T6L9	678 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PIP5KL1	Q5T9C9	394 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	E4F1	Q66K89	784 aa	Predicted RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DPY19L3	Q6ZPD9	716 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ERN2	Q76MJ5	926 aa	Known RBP	12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	OR2I1P	Q8NGU4	316 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RAB7B	Q96AH8	199 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SERAC1	Q96JX3	654 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	OSBPL1A	Q9BXW6	950 aa		12.83	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	AASDHPPT	Q9NRN7	309 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms