RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DGKAP23743 735 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 EPHB3P54753 998 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 TRAP1Q12931 704 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 CCL15Q16663 113 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 DENND5AQ6IQ26 1287 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 NT5DC4Q86YG4 428 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 SCUBE3Q8IX30 993 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 KBTBD2Q8IY47 623 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 SFRP1Q8N474 314 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 DNERQ8NFT8 737 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 NELL1Q92832 810 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 BORCS5Q969J3 196 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 ZDHHC15Q96MV8 337 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 SPATA13Q96N96 652 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■■■■□ 21.8
CSNK1D-217ENST00000581241 LACTBL1A8MY62 500 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 SLC28A1O00337 649 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 HOXA2O43364 376 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 NPR3P17342 541 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 PSMD4P55036 377 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 SLC5A9Q2M3M2 681 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 ZNF280DQ6N043 979 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 TRMT11Q7Z4G4 463 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 QKIQ96PU8 341 aaKnown RBP eCLIP14.72□□□□□ -0.058e-9■■■■□ 23.9
CSNK1D-217ENST00000581241 C3orf18Q9UK00 162 aa14.72□□□□□ -0.05
CSNK1D-217ENST00000581241 SIGLEC16A6NMB1 481 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 CRATP43155 626 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 PLCL1Q15111 1095 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 GNASQ5JWF2 1037 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 INTS11Q5TA45 600 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 BRSK2Q8IWQ3 736 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 HASPINQ8TF76 798 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 RTKNQ9BST9 563 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 BLOC1S4Q9NUP1 217 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 SNCAIPQ9Y6H5 919 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 LRRC10BA6NIK2 292 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 F8VP50 259 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 SPTLC1O15269 473 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 SSNA1O43805 119 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 S100A9P06702 114 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 CYP2A6P11509 494 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 MAPKAPK2P49137 400 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 GMPSP49915 693 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 MTTPP55157 894 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 GNA13Q14344 377 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 HYIQ5T013 277 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 FAM117BQ6P1L5 589 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 AKAP14Q86UN6 197 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 MAP4K3Q8IVH8 894 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 SYTL5Q8TDW5 730 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 ZHX1-C8orf76Q96EF9 292 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 SLC47A1Q96FL8 570 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 NLNQ9BYT8 704 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 CDH19Q9H159 772 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 DEFB129Q9H1M3 183 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 RAP2CQ9Y3L5 183 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 RBAK-RBAKDNI3L0D1 243 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 CYP7B1O75881 506 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 RPLP2P05387 115 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 MYBL2P10244 700 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 ATP5F1P24539 256 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 AKAP5P24588 427 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 DRG2P55039 364 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 DDI2Q5TDH0 399 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 LRRC38Q5VT99 294 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 SNX6Q9UNH7 406 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 CASTOR2A6NHX0 329 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 MLYCDO95822 493 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 RARRES1P49788 294 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 COMMD2Q86X83 199 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 EEF1AKMT1Q8WVE0 214 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 POPDC2Q9HBU9 364 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 CRYL1Q9Y2S2 319 aa14.71□□□□□ -0.05
CSNK1D-217ENST00000581241 DBTP11182 482 aaKnown RBP14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 MMP13P45452 471 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 CLCN5P51795 746 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 IL2P60568 153 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 SLC15A2Q16348 729 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 METTL7BQ6UX53 244 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 NANOGNBQ7Z5D8 188 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 STAG3L4Q8TBR4 150 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 GIPC3Q8TF64 312 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 CERS2Q96G23 380 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 TOR4AQ9NXH8 423 aa14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 HBS1LQ9Y450 684 aaKnown RBP14.71□□□□□ -0.06
CSNK1D-217ENST00000581241 BOP1Q14137 746 aaKnown RBP14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 PFKFB4Q16877 469 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 PRAMEF18Q5VWM3 479 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 HIPK1Q86Z02 1210 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 OFCC1Q8IZS5 231 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 OR52K1Q8NGK4 314 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 CCDC3Q9BQI4 270 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 MTIF3Q9H2K0 278 aaKnown RBP14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 TDRKHQ9Y2W6 561 aaKnown RBP14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 BANF1O75531 89 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 CST1P01037 141 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 CKBP12277 381 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 ITGA2P17301 1181 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 FCHO2Q0JRZ9 810 aa14.7□□□□□ -0.06
CSNK1D-217ENST00000581241 CCDC80Q76M96 950 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms