RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 OR2A12Q8NGT7 310 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 FEM1CQ96JP0 617 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 NOX5Q96PH1 765 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 CCNL2Q96S94 520 aaPredicted RBP13.67□□□□□ -0.22
COPS3-214ENST00000577246 IL12RB2Q99665 862 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 SLC17A9Q9BYT1 436 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 GPR27Q9NS67 375 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 IL36AQ9UHA7 158 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 OR51B4Q9Y5P0 310 aa13.67□□□□□ -0.22
COPS3-214ENST00000577246 NYNRINQ9P2P1 1898 aaKnown RBP13.67□□□□□ -0.22
COPS3-214ENST00000577246 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 SYNJ2BP-COX16A0A087WUM0 186 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 CCDC187A0A096LP49 1063 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 FPGTO14772 594 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 HSF2BPO75031 334 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 TNFSF15O95150 251 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 RHOCP08134 193 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 SFTPCP11686 197 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 KRT5P13647 590 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 INHBCP55103 352 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
COPS3-214ENST00000577246 STIM1Q13586 685 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 PKP1Q13835 747 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 FZD2Q14332 565 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 ARL13BQ3SXY8 428 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 CCDC40Q4G0X9 1142 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 ZNF542PQ5EBM4 170 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 EFHC1Q5JVL4 640 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 SEL1L3Q68CR1 1132 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 OR6B2Q6IFH4 312 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 GUSBP11Q6P575 273 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 KAT5Q92993 513 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 ARRDC3Q96B67 414 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 GSDMAQ96QA5 445 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.66□□□□□ -0.22
COPS3-214ENST00000577246 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
COPS3-214ENST00000577246 ASNSD1Q9NWL6 643 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 COX16Q9P0S2 106 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
COPS3-214ENST00000577246 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
COPS3-214ENST00000577246 ZFR2Q9UPR6 939 aaKnown RBP13.66□□□□□ -0.22
COPS3-214ENST00000577246 MYO18BQ8IUG5 2567 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 PSMA7O14818 248 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 SMC2O95347 1197 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 GJB6O95452 261 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 JUNDP17535 347 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 SNX16P57768 344 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 NFATC3Q12968 1075 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 CLN3Q13286 438 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 SGCGQ13326 291 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
COPS3-214ENST00000577246 PDCLQ13371 301 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 PDE1CQ14123 709 aaPredicted RBP13.65□□□□□ -0.22
COPS3-214ENST00000577246 SPIDRQ14159 915 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 ACBD5Q5T8D3 534 aaPredicted RBP13.65□□□□□ -0.22
COPS3-214ENST00000577246 DENND1BQ6P3S1 775 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 SETD3Q86TU7 594 aaPredicted RBP13.65□□□□□ -0.22
COPS3-214ENST00000577246 DCAF4L2Q8NA75 395 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 GRIN3AQ8TCU5 1115 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 LMX1AQ8TE12 382 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 BMFQ96LC9 184 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 TBATAQ96M53 351 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 LENG8Q96PV6 779 aaPredicted RBP13.65□□□□□ -0.22
COPS3-214ENST00000577246 SLC2A13Q96QE2 648 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 ARHGAP9Q9BRR9 750 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 IL17BQ9UHF5 180 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 VPS51Q9UID3 782 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 HS3ST4Q9Y661 456 aa13.65□□□□□ -0.22
COPS3-214ENST00000577246 ARID1BQ8NFD5 2236 aaPredicted RBP13.65□□□□□ -0.22
COPS3-214ENST00000577246 POM121BA6NF01 834 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 CYSRT1A8MQ03 144 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 TMX2-CTNND1H3BSU7 103 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 PYCARD-AS1I3L0S3 204 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 MUSKO15146 869 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 AP1G1O43747 822 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
COPS3-214ENST00000577246 PAK4O96013 591 aaPredicted RBP13.64□□□□□ -0.23
COPS3-214ENST00000577246 CALCAP01258 141 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 ITGB2P05107 769 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 ADRB3P13945 408 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 RRM1P23921 792 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 ITGB7P26010 798 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 PPP1R2P41236 205 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 PITX1P78337 314 aaPredicted RBP13.64□□□□□ -0.23
COPS3-214ENST00000577246 NME3Q13232 169 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 PTK2BQ14289 1009 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 DEFB133Q30KQ1 61 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 C6orf132Q5T0Z8 1188 aa13.64□□□□□ -0.23
COPS3-214ENST00000577246 RETSATQ6NUM9 610 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms