RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ACACBO00763 2458 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 MAP1BP46821 2468 aaKnown RBP6.48□□□□□ -1.37
NUP88-212ENST00000576708 PCDH15Q96QU1 1955 aa6.48□□□□□ -1.37
NUP88-212ENST00000576708 FRYQ5TBA9 3013 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 ZFHX4Q86UP3 3567 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 EPG5Q9HCE0 2579 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CEP192Q8TEP8 1941 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 MEI4A8MW99 385 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 SLC16A3O15427 465 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 OPHN1O60890 802 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CYBBP04839 570 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CEACAM5P06731 702 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 EPHX1P07099 455 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 VDRP11473 427 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 NCAM1P13591 858 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 HOXD9P28356 352 aaPredicted RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 HLA-FP30511 346 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 SLC6A4P31645 630 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CD70P32970 193 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 FMO5P49326 533 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 TPMTP51580 245 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 BCAT1P54687 386 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 DAOAP59103 153 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 FKBP3Q00688 224 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 BNC1Q01954 994 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 BST2Q10589 180 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 ENPP2Q13822 863 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 STARD3Q14849 445 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 DCAF12L1Q5VU92 463 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 KLHL10Q6JEL2 608 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 PMF1Q6P1K2 205 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 RFWD3Q6PCD5 774 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 TMEM270Q6UE05 265 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 RRAGAQ7L523 313 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 ANKS1BQ7Z6G8 1248 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 FAM217AQ8IXS0 508 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 ARHGAP18Q8N392 663 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CPXM2Q8N436 756 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CHCHD4Q8N4Q1 142 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 ZCCHC9Q8N567 271 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 TTC39CQ8N584 583 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 PNPLA1Q8N8W4 532 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 OR6P1Q8NGX9 317 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 RNF139Q8WU17 664 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 RNF141Q8WVD5 230 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 SMARCE1Q969G3 411 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 SIPA1Q96FS4 1042 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 FAXDC2Q96IV6 333 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 IPO9Q96P70 1041 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 CDK5RAP1Q96SZ6 601 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 KRTAP4-12Q9BQ66 201 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 DNAI2Q9GZS0 605 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 MIS12Q9H081 205 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 SLC32A1Q9H598 525 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 RMND1Q9NWS8 449 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 WSB2Q9NYS7 404 aaPredicted RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 USP36Q9P275 1121 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 HESX1Q9UBX0 185 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 ARMCX3Q9UH62 379 aaPredicted RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 MAN1B1Q9UKM7 699 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 PCDHB10Q9UN67 800 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 PCDHB4Q9Y5E5 795 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 ATP6V1DQ9Y5K8 247 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CAPN6Q9Y6Q1 641 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 CNOT1A5YKK6 2376 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 TPRP12270 2363 aaKnown RBP6.47□□□□□ -1.37
NUP88-212ENST00000576708 CHD8Q9HCK8 2581 aa6.47□□□□□ -1.37
NUP88-212ENST00000576708 GOLGA6L4A6NEF3 574 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 M0QYV0 167 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 BIN1O00499 593 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 KCNK3O14649 394 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SYNCRIPO60506 623 aaKnown RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 TBL1XO60907 577 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 GJB3O75712 270 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SMC2O95347 1197 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 TP53P04637 393 aaPredicted RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 FYNP06241 537 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SYPP08247 313 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 HOXD12P35452 270 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 DPP6P42658 865 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 HARS2P49590 506 aaKnown RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 NUMBP49757 651 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 STX17P56962 302 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SLC8A3P57103 927 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 CACNA1BQ00975 2339 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 GRIK2Q13002 908 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 NKPD1Q17RQ9 610 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 MSMPQ1L6U9 139 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 CCDC40Q4G0X9 1142 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 FNDC3BQ53EP0 1204 aaKnown RBP6.46□□□□□ -1.38
NUP88-212ENST00000576708 MPPE1Q53F39 396 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 COBLL1Q53SF7 1204 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SYCP2LQ5T4T6 812 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 NADSYN1Q6IA69 706 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 DENND1BQ6P3S1 775 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 LCLAT1Q6UWP7 414 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 SERPINA13PQ6UXR4 307 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 CHST9Q7L1S5 443 aa6.46□□□□□ -1.38
NUP88-212ENST00000576708 ADIPOR2Q86V24 386 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms