RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 HPCAP84074 193 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 PLCL1Q15111 1095 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 GALNT18Q6P9A2 607 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ADGRF2Q8IZF7 708 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 FBXO30Q8TB52 745 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 C1orf21Q9H246 121 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ALG9Q9H6U8 611 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 STX7O15400 261 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 KATNA1O75449 491 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 MLNP12872 115 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 GJA8P48165 433 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CCNG1P51959 295 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 MAP3K7CLP57077 242 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 RAB15P59190 212 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ARL13AQ5H913 290 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 PCID2Q5JVF3 399 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 DNAJC14Q6Y2X3 702 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CBR4Q8N4T8 237 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 FAM156AQ8NDB6 213 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 OMA1Q96E52 524 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 TBL1YQ9BQ87 522 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 TMEM245Q9H330 911 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZNF395Q9H8N7 513 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ACSS2Q9NR19 701 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 AAASQ9NRG9 546 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 IGLV3-22A0A075B6J6 115 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 PLA2G6O60733 806 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CHRM1P11229 460 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ADSLP30566 484 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 HOXD13P35453 343 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 RPL26P61254 145 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 LSM12Q3MHD2 195 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CMPK2Q5EBM0 449 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 TRMT10BQ6PF06 316 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ZC3H3Q8IXZ2 948 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 SPATA6LQ8N4H0 392 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 SDCBP2Q9H190 292 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 C3orf18Q9UK00 162 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 BTBD3Q9Y2F9 522 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 NADKO95544 446 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ERBB2P04626 1255 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CSH1P0DML2 217 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CSH2P0DML3 217 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 SLC2A4P14672 509 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 GOT1P17174 413 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 TJAP1Q5JTD0 557 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 VSIG10LQ86VR7 867 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 RELL1Q8IUW5 271 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ADHFE1Q8IWW8 467 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ARL10Q8N8L6 244 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 OR2T34Q8NGX1 318 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 OR2T3Q8NH03 318 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 ADAM32Q8TC27 787 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CD101Q93033 1021 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 GPATCH1Q9BRR8 931 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 GATA5Q9BWX5 397 aaPredicted RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 DPY30Q9C005 99 aa13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 RBMX2Q9Y388 322 aaKnown RBP13.28□□□□□ -0.28
PCDHGB3-201ENST00000576222 CCDC189A1A4V9 331 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 DLDP09622 509 aaKnown RBP13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 TSPAN8P19075 237 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 CCR1P32246 355 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 ITGA7Q13683 1181 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 GPR162Q16538 588 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 UGT3A1Q6NUS8 523 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 SPESP1Q6UW49 350 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 ANKRD13AQ8IZ07 590 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 CERKQ8TCT0 537 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 SKA1Q96BD8 255 aa13.27□□□□□ -0.28
PCDHGB3-201ENST00000576222 BCLAF3A2AJT9 711 aaKnown RBP13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 C5orf58C9J3I9 102 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 PMM2O15305 246 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 VTNP04004 478 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 EIF2S1P05198 315 aaKnown RBP13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 FAM45BPQ6NSW5 357 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 ILDR2Q71H61 639 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 FASTKD5Q7L8L6 764 aaKnown RBP13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 SNX31Q8N9S9 440 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 UNC93B1Q9H1C4 597 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 CACNA2D2Q9NY47 1150 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 CDH9Q9ULB4 789 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 AKAP12Q02952 1782 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 LSM1O15116 133 aaKnown RBP13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 PAPSS1O43252 624 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms