RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 METTL25Q8N6Q8 603 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 DGCR14Q96DF8 476 aaKnown RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 CNBD2Q96M20 576 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 OSMRQ99650 979 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 PKP2Q99959 881 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 NDUFA13Q9P0J0 144 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 CDYLQ9Y232 598 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 SCN4AP35499 1836 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 ERI2A8K979 691 aaKnown RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 CLPTM1O96005 669 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 CD4P01730 458 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 SLC35E2BP0CK96 405 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 RPL5P46777 297 aaKnown RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 PDCD2Q16342 344 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 NOTUMQ6P988 496 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 CLEC20AQ6ZU45 233 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 ARHGAP22Q7Z5H3 698 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 ERO1BQ86YB8 467 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 CENPLQ8N0S6 344 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 SIX6OS1Q8N1H7 587 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 FSTL5Q8N475 847 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-206ENST00000573852 STYXQ8WUJ0 223 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 Q9H521 79 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 ZBTB26Q9HCK0 441 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 ANKRD6Q9Y2G4 727 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 SNX10Q9Y5X0 201 aa19.37■□□□□ 0.69
SCARF1-206ENST00000573852 TARM1B6A8C7 271 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 CXCL11O14625 94 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 SLC22A2O15244 555 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 DLX3O60479 287 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 HUS1O60921 280 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 GPR32O75388 356 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 TAF6P49848 677 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 TKTL1P51854 596 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 MYBPC1Q00872 1141 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 R3HDM1Q15032 1099 aaKnown RBP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 RBM44Q6ZP01 1051 aaKnown RBP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 ZNF560Q96MR9 790 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 KLHL32Q96NJ5 620 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 APPL1Q9UKG1 709 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 PDCD11Q14690 1871 aaKnown RBP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 MYOCOSA0A1B0GUC4 107 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 TMEM233B4DJY2 109 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 DDHD2O94830 711 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 AHSGP02765 367 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 ME2P23368 584 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 CDKL1Q00532 357 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 TTLL12Q14166 644 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 ZNF460Q14592 562 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 C6orf52Q5T4I8 152 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 SETD3Q86TU7 594 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 SLC41A1Q8IVJ1 513 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 ADCY4Q8NFM4 1077 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 OPTNQ96CV9 577 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 MPP4Q96JB8 637 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 NPAS2Q99743 824 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 RHOJQ9H4E5 214 aa19.36■□□□□ 0.69
SCARF1-206ENST00000573852 GNEQ9Y223 722 aaKnown RBP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 COPG1Q9Y678 874 aaKnown RBP19.36■□□□□ 0.69
SCARF1-206ENST00000573852 PRSS51A0A1B0GVH4 220 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 YJEFN3A6XGL0 299 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 SRGAP2BP0DMP2 458 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 HK2P52789 917 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 MAP3K7CLP57077 242 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 ART3Q13508 389 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 NADK2Q4G0N4 442 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 CTU1Q7Z7A3 348 aaKnown RBP19.35■□□□□ 0.69
SCARF1-206ENST00000573852 TMEM126BQ8IUX1 230 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 GALNT4Q8N4A0 578 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 SPATA6LQ8N4H0 392 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 FAM156AQ8NDB6 213 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 KCTD13Q8WZ19 329 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 SLC9A7Q96T83 725 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 UNKQ9C0B0 810 aaKnown RBP19.35■□□□□ 0.69
SCARF1-206ENST00000573852 VTI1BQ9UEU0 232 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 RAD54BQ9Y620 910 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 TCAF2A6NFQ2 919 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 ACOT8O14734 319 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 NCAM2O15394 837 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 BCAS2O75934 225 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-206ENST00000573852 JCHAINP01591 159 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 PTPN1P18031 435 aaKnown RBP19.35■□□□□ 0.69
SCARF1-206ENST00000573852 TCN1P20061 433 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-206ENST00000573852 IGFBP6P24592 240 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-206ENST00000573852 HADHAP40939 763 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 HERC3Q15034 1050 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 EMID1Q96A84 441 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-206ENST00000573852 NTAN1Q96AB6 310 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 HDAC11Q96DB2 347 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 TSNARE1Q96NA8 513 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 ULBP1Q9BZM6 244 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 EFCAB1Q9HAE3 211 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 FBXW11Q9UKB1 542 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 TRHDEQ9UKU6 1024 aa19.35■□□□□ 0.69
SCARF1-206ENST00000573852 CYP2C9P11712 490 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 ADSLP30566 484 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-206ENST00000573852 LILRA4P59901 499 aa19.34■□□□□ 0.69
SCARF1-206ENST00000573852 SLC12A1Q13621 1099 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms