RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 TAF5Q15542 800 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 TBC1D3GQ6DHY5 549 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 TBC1D3CQ6IPX1 549 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 ALKBH5Q6P6C2 394 aaKnown RBP15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 OLFML1Q6UWY5 402 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 TMTC1Q8IUR5 882 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 MCOLN2Q8IZK6 566 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 TBC1D3Q8IZP1 549 aaPredicted RBP15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 FRS2Q8WU20 508 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 FAM131CQ96AQ9 280 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 TRIM11Q96F44 468 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 LRIG1Q96JA1 1093 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 VCPIP1Q96JH7 1222 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 SELENOOQ9BVL4 669 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 ASNSD1Q9NWL6 643 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC12A6Q9UHW9 1150 aa15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 ARID1BQ8NFD5 2236 aaPredicted RBP15.19■□□□□ 0.02
NPLOC4-207ENST00000572346 A0A087WV48 116 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 A0A1B0GVM2 712 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 TCAF2A6NFQ2 919 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 E9PAM4 449 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 TLR4O00206 839 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 PLK4O00444 970 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 RFPL3O75679 317 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 CYLC1P35663 651 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 SCNN1AP37088 669 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 ARRB1P49407 418 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 CLDN6P56747 220 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 SULT2A1Q06520 285 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 BNIP3Q12983 259 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC18A3Q16572 532 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC45A4Q5BKX6 768 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 TTC39BQ5VTQ0 682 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 NAPEPLDQ6IQ20 393 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 CXorf57Q6NSI4 855 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 DNAJC24Q6P3W2 148 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC26A9Q7LBE3 791 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 DEFB106AQ8N104 65 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 EID2Q8N6I1 236 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 ZNF653Q96CK0 615 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 BAG1Q99933 345 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 FAM204AQ9H8W3 233 aa15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 METTL5Q9NRN9 209 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-207ENST00000572346 LOC400499M0QZD8 3231 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 SYNJ2BP-COX16A0A087WUM0 186 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 ANKRD62A6NC57 917 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 NRDCO43847 1150 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 DAB1O75553 588 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 IPO7O95373 1038 aaKnown RBP15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 C1SP09871 688 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC2A3P11169 496 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 KRT3P12035 628 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 JUPP14923 745 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 CCR1P32246 355 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 HNF1BP35680 557 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 RXRGP48443 463 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 ACADVLP49748 655 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 RABGAP1LQ5R372 815 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 FBXL22Q6P050 247 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 DCUN1D2Q6PH85 259 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 SPATS2Q86XZ4 545 aaKnown RBP15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 DNAAF5Q86Y56 855 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 MFSD2AQ8NA29 543 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 OR52K2Q8NGK3 314 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 OR8D1Q8WZ84 308 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 ALG14Q96F25 216 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 BBC3Q96PG8 261 aaPredicted RBP15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC2A13Q96QE2 648 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 ISCUQ9H1K1 167 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 KDM4CQ9H3R0 1056 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 ERVMER34-1Q9H9K5 563 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 SPTLC3Q9NUV7 552 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 DDIT4Q9NX09 232 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 COX16Q9P0S2 106 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 SARDHQ9UL12 918 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 STAP1Q9ULZ2 295 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 ASXL3Q9C0F0 2248 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 MYLKQ15746 1914 aa15.17■□□□□ 0.02
NPLOC4-207ENST00000572346 SLC7A4O43246 635 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 PLRG1O43660 514 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 H2AFZP0C0S5 128 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 MYBL1P10243 752 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 CDK4P11802 303 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 RRM1P23921 792 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 MAT2AP31153 395 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 NOS2P35228 1153 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 VASPP50552 380 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 IRAK1P51617 712 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 OXCT1P55809 520 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 SPA17Q15506 151 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 ASTE1Q2TB18 679 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 ACCSLQ4AC99 568 aa15.16■□□□□ 0.02
NPLOC4-207ENST00000572346 H2AFVQ71UI9 128 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms