RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	DDX56	Q9NY93	547 aa	Known RBP	18.34	■□□□□ 0.53
PKD1-238	ENST00000570150	IL36A	Q9UHA7	158 aa		18.34	■□□□□ 0.53
PKD1-238	ENST00000570150	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
PKD1-238	ENST00000570150	OTOGL	Q3ZCN5	2332 aa		18.34	■□□□□ 0.53
PKD1-238	ENST00000570150	METTL12	A8MUP2	240 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	POP4	O95707	220 aa	Known RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	IGSF6	O95976	241 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	SYP	P08247	313 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	ERCC2	P18074	760 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	PSMD8	P48556	350 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	RENBP	P51606	427 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	SUOX	P51687	545 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	ARF5	P84085	180 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	SLC25A11	Q02978	314 aa	Known RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	DPYS	Q14117	519 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	ZFYVE27	Q5T4F4	411 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	ARTN	Q5T4W7	220 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	PRR23C	Q6ZRP0	262 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	DNAAF5	Q86Y56	855 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	RGL4	Q8IZJ4	473 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	OR2A12	Q8NGT7	310 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	NETO1	Q8TDF5	533 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	DNASE2B	Q8WZ79	361 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	PIGK	Q92643	395 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	HSPA12B	Q96MM6	686 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	PEBP4	Q96S96	227 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	KCTD15	Q96SI1	283 aa	Predicted RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	BAG1	Q99933	345 aa	Predicted RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	GPR174	Q9BXC1	333 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	LRRC19	Q9H756	370 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	OSGEP	Q9NPF4	335 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	CWC15	Q9P013	229 aa	Known RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	UBA2	Q9UBT2	640 aa	Predicted RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	PILRB	Q9UKJ0	227 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	MYO18A	Q92614	2054 aa	Known RBP	18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	ATG2B	Q96BY7	2078 aa		18.33	■□□□□ 0.52
PKD1-238	ENST00000570150	GPR179	Q6PRD1	2367 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	CKAP5	Q14008	2032 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	MID1	O15344	667 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	NDUFA10	O95299	355 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	ZFX	P17010	805 aa	Predicted RBP	18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	HSPA9	P38646	679 aa	Known RBP	18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	NOP2	P46087	812 aa	Known RBP	18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	ID4	P47928	161 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	DNA2	P51530	1060 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	CCR5	P51681	352 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	LIMK1	P53667	647 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	CDH6	P55285	790 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	TEAD4	Q15561	434 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	AASDH	Q4L235	1098 aa	Predicted RBP	18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	KCNT1	Q5JUK3	1230 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	RHOT1	Q8IXI2	618 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	HDDC3	Q8N4P3	179 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	OR2AP1	Q8NGE2	309 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	PIP4K2C	Q8TBX8	421 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	FAM71B	Q8TC56	605 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	HCAR2	Q8TDS4	363 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	RAB7B	Q96AH8	199 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	CSPG4P5	Q96PW8	444 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	HDAC8	Q9BY41	377 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	SLC6A17	Q9H1V8	727 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	SP110	Q9HB58	689 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	PREB	Q9HCU5	417 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	SLC6A14	Q9UN76	642 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	PCDHA13	Q9Y5I0	950 aa		18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	MUC22	E2RYF6	1773 aa	Predicted RBP	18.32	■□□□□ 0.52
PKD1-238	ENST00000570150	PRAMEF11	O60813	436 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	MT-CO1	P00395	513 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	SERPINF2	P08697	491 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	MX2	P20592	715 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	NFKBIA	P25963	317 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	ACVRL1	P37023	503 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	IL10RB	Q08334	325 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	MESD	Q14696	234 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	SMTNL2	Q2TAL5	461 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	SLC45A4	Q5BKX6	768 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	AFMID	Q63HM1	303 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	SLC23A3	Q6PIS1	610 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	IL27RA	Q6UWB1	636 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	LINGO4	Q6UY18	593 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	CCDC112	Q8NEF3	446 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	FAM131C	Q96AQ9	280 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	HMCES	Q96FZ2	354 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	ZNF830	Q96NB3	372 aa	Predicted RBP	18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	CALN1	Q9BXU9	219 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	MAK16	Q9BXY0	300 aa	Known RBP	18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	PACSIN1	Q9BY11	444 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	PCDH18	Q9HCL0	1135 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	NDFIP2	Q9NV92	336 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	GPATCH2L	Q9NWQ4	482 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	HECA	Q9UBI9	543 aa	Predicted RBP	18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	CDV3	Q9UKY7	258 aa	Known RBP	18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	MFHAS1	Q9Y4C4	1052 aa		18.31	■□□□□ 0.52
PKD1-238	ENST00000570150	ZNF292	O60281	2723 aa		18.3	■□□□□ 0.52
PKD1-238	ENST00000570150	WDR87	Q6ZQQ6	2873 aa		18.3	■□□□□ 0.52
PKD1-238	ENST00000570150	PLXND1	Q9Y4D7	1925 aa		18.3	■□□□□ 0.52
PKD1-238	ENST00000570150		A0A1B0GTW7	788 aa		18.3	■□□□□ 0.52
PKD1-238	ENST00000570150		A0A1W2PP55	124 aa		18.3	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms