RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 ROPN1BQ9BZX4 212 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 STMN4Q9H169 189 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 S1PR5Q9H228 398 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 NOL6Q9H6R4 1146 aaKnown RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 LRRC40Q9H9A6 602 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 VPS37BQ9H9H4 285 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 PPCSQ9HAB8 311 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 ROPN1Q9HAT0 212 aaPredicted RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 RBM22Q9NW64 420 aaKnown RBP eCLIP7.79□□□□□ -1.16
CDH13-214ENST00000569455 TBC1D14Q9P2M4 693 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 PRKAG3Q9UGI9 489 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 TBC1D30Q9Y2I9 924 aa7.79□□□□□ -1.16
CDH13-214ENST00000569455 MRPS23Q9Y3D9 190 aaKnown RBP7.79□□□□□ -1.16
CDH13-214ENST00000569455 H0Y626 953 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 AGPSO00116 658 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TRDMT1O14717 391 aaKnown RBP7.78□□□□□ -1.16
CDH13-214ENST00000569455 SLC9A3R1O14745 358 aaPredicted RBP7.78□□□□□ -1.16
CDH13-214ENST00000569455 GREM1O60565 184 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 PRAMEF11O60813 436 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TBL1XO60907 577 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TBX10O75333 385 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 MOSPD3O75425 235 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 SUN1O94901 812 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 LUC7L3O95232 432 aaKnown RBP7.78□□□□□ -1.16
CDH13-214ENST00000569455 AP2A1O95782 977 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 CPP00450 1065 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 GSTA2P09210 222 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TCF3P15923 654 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 KCNA5P22460 613 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 CCR2P41597 374 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 ELK3P41970 407 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 MMP13P45452 471 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 GEMP55040 296 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 CDH18Q13634 790 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 ZNF235Q14590 738 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 PRSS36Q5K4E3 855 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 FNBP1LQ5T0N5 605 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 MPP7Q5T2T1 576 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 STXBP5Q5T5C0 1151 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 IL31Q6EBC2 164 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 LRRC8BQ6P9F7 803 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 SYCE2Q6PIF2 218 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 CARNMT1Q8N4J0 409 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 KIAA1958Q8N8K9 716 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 ZNF557Q8N988 423 aaPredicted RBP7.78□□□□□ -1.16
CDH13-214ENST00000569455 TDRD5Q8NAT2 981 aaKnown RBP7.78□□□□□ -1.16
CDH13-214ENST00000569455 FBXO36Q8NEA4 188 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TTC16Q8NEE8 873 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 SH3RF2Q8TEC5 729 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 DDI1Q8WTU0 396 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 SUSD6Q92537 303 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 WBP2Q969T9 261 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 ZNF707Q96C28 371 aaPredicted RBP7.78□□□□□ -1.16
CDH13-214ENST00000569455 TCEAL4Q96EI5 215 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 MYEOVQ96EZ4 313 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 PHOX2BQ99453 314 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 NAT9Q9BTE0 207 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 SPON2Q9BUD6 331 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TMEM109Q9BVC6 243 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 MUC3BQ9H195 1237 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 EPB41L4BQ9H329 900 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 CENPHQ9H3R5 247 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 KIF9Q9HAQ2 790 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 GLOD4Q9HC38 313 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 ATP13A1Q9HD20 1204 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TDP1Q9NUW8 608 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 TTLL3Q9Y4R7 772 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 NFS1Q9Y697 457 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.78□□□□□ -1.16
CDH13-214ENST00000569455 C2orf16Q68DN1 1984 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 SPTBN4Q9H254 2564 aa7.78□□□□□ -1.16
CDH13-214ENST00000569455 GRXCR2A6NFK2 248 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 SDR42E2A6NKP2 422 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 HMGB1P1B2RPK0 211 aaPredicted RBP7.77□□□□□ -1.17
CDH13-214ENST00000569455 F5H423 210 aaPredicted RBP7.77□□□□□ -1.17
CDH13-214ENST00000569455 J3KR12 359 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 GFRA2O00451 464 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 RASGRF2O14827 1237 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 LINC01565O15544 149 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 KDELR3O43731 214 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 CACNG3O60359 315 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 RNF40O75150 1001 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 TCEA3O75764 348 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 SYF2O95926 243 aaKnown RBP7.77□□□□□ -1.17
CDH13-214ENST00000569455 HLA-DQB2P05538 268 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 ATP5DP30049 168 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 WEE1P30291 646 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 STX2P32856 288 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 CD68P34810 354 aaPredicted RBP7.77□□□□□ -1.17
CDH13-214ENST00000569455 ACVRL1P37023 503 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 MAGEA3P43357 314 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 GEMIN4P57678 1058 aaKnown RBP7.77□□□□□ -1.17
CDH13-214ENST00000569455 NTHL1P78549 312 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 GAD2Q05329 585 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 TNK2Q07912 1038 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 ITKQ08881 620 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 MPP3Q13368 585 aa7.77□□□□□ -1.17
CDH13-214ENST00000569455 RFTN1Q14699 578 aaPredicted RBP7.77□□□□□ -1.17
CDH13-214ENST00000569455 LBRQ14739 615 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms