RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PCDHGA12O60330 932 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 PLEKP08567 350 aaPredicted RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 CHRNA3P32297 505 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 SFSWAPQ12872 951 aaKnown RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 MAMLD1Q13495 774 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 SHBQ15464 509 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 TEAD4Q15561 434 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ARL13BQ3SXY8 428 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ACCSLQ4AC99 568 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 FIGNQ5HY92 759 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 FAM46CQ5VWP2 391 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 NAPEPLDQ6IQ20 393 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 PLEKHA7Q6IQ23 1121 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ACAD10Q6JQN1 1059 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 DPY19L3Q6ZPD9 716 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ZNF571Q7Z3V5 609 aaPredicted RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 RAB44Q7Z6P3 723 aaPredicted RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 DNAAF5Q86Y56 855 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 PYROXD2Q8N2H3 581 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ARFGAP1Q8N6T3 406 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 TMEM145Q8NBT3 493 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 TMIEQ8NEW7 156 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 GATA6Q92908 595 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ARHGEF2Q92974 986 aaKnown RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 TRIM7Q9C029 511 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 CEP44Q9C0F1 390 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 TNKS2Q9H2K2 1166 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 RETREG1Q9H6L5 497 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 CBX8Q9HC52 389 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ATP13A1Q9HD20 1204 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 SEPT11Q9NVA2 429 aaKnown RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 AIPL1Q9NZN9 384 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 TPX2Q9ULW0 747 aaKnown RBP7.99□□□□□ -1.13
CDH3-209ENST00000569080 CHD6Q8TD26 2715 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 PTPRBP23467 1997 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 ITPR1Q14643 2758 aa7.99□□□□□ -1.13
CDH3-209ENST00000569080 DSPP15924 2871 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 PLXNB3Q9ULL4 1909 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 A0A1B0GTQ1 180 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 SMTNL1A8MU46 457 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 WASH4PA8MWX3 477 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 CBX4O00257 560 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 KCNK3O14649 394 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 FLRT2O43155 660 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 SPINT1O43278 529 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 BNIP3LO60238 219 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 LEFTY1O75610 366 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 FTH1P19P0C7X4 201 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 L1CAMP32004 1257 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 CCT8P50990 548 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 CCNHP51946 323 aaPredicted RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 NXPH1P58417 271 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 HNRNPDQ14103 355 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 NR1I3Q14994 352 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 TRIP6Q15654 476 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 TMEM259Q4ZIN3 620 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 HGSNATQ68CP4 663 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 RETSATQ6NUM9 610 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 RWDD4Q6NW29 188 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 KANSL1Q7Z3B3 1105 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 SLFN11Q7Z7L1 901 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 LUZP1Q86V48 1076 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 SPATS2Q86XZ4 545 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 PCDH20Q8N6Y1 951 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 RTL3Q8N8U3 475 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 GRIN3AQ8TCU5 1115 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 ISG20Q96AZ6 181 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 VCPIP1Q96JH7 1222 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 SERAC1Q96JX3 654 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 PEBP4Q96S96 227 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 CNPY3Q9BT09 278 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 SPON2Q9BUD6 331 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 SCNM1Q9BWG6 230 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 HDAC8Q9BY41 377 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 KLC2Q9H0B6 622 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 HAUS4Q9H6D7 363 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 PREBQ9HCU5 417 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 IL36AQ9UHA7 158 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 DNAI1Q9UI46 699 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 KLK13Q9UKR3 277 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 FZD10Q9ULW2 581 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 FCF1Q9Y324 198 aaKnown RBP7.98□□□□□ -1.13
CDH3-209ENST00000569080 NEUROG3Q9Y4Z2 214 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 LOC400499M0QZD8 3231 aa7.98□□□□□ -1.13
CDH3-209ENST00000569080 PKD1L2Q7Z442 2459 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 NBEAQ8NFP9 2946 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ARID1BQ8NFD5 2236 aaPredicted RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3DA0A087WVF3 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3IA0A087WXS9 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3EA0A087X179 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3KA0A087X1G2 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3FA6NER0 549 aaPredicted RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 C1QTNF9BB2RNN3 333 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3LB9A6J9 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 KPNA3O00505 521 aaPredicted RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 RAMP2O60895 175 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 PRNPP04156 253 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 CCDC172P0C7W6 258 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms