RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 BCAT1P54687 386 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 COG7P83436 770 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 FSCBQ5H9T9 825 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 SEL1L3Q68CR1 1132 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 TAPT1Q6NXT6 567 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 CEP97Q8IW35 865 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 BRI3BPQ8WY22 251 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 IL1RL2Q9HB29 575 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 CHST12Q9NRB3 414 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 TMEM30AQ9NV96 361 aa17.41■□□□□ 0.38
VAC14-210ENST00000568548 ANKRD33BA6NCL7 494 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 SBK3P0C264 359 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 GABRB3P28472 473 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 SERPINB8P50452 374 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 TKTL1P51854 596 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 LIMK2P53671 638 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 CYLC2Q14093 348 aaPredicted RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 GRIK4Q16099 956 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 PPP1R3AQ16821 1122 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 SLC25A52Q3SY17 297 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 PRAMEF19Q5SWL8 479 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 MARCH8Q5T0T0 291 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 WSCD1Q658N2 575 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 ZBTB46Q86UZ6 589 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 SIX6OS1Q8N1H7 587 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 FSTL5Q8N475 847 aaPredicted RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 IPMKQ8NFU5 416 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 ACMSDQ8TDX5 336 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 GTF3C2Q8WUA4 911 aaPredicted RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 MRPL1Q9BYD6 325 aaKnown RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 LRRC40Q9H9A6 602 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 DDIT4Q9NX09 232 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 XPR1Q9UBH6 696 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 DFFAO00273 331 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 TFAP2AP05549 437 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 HNRNPDQ14103 355 aaKnown RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 MAP7Q14244 749 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 GRTP1Q5TC63 336 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 LDB1Q86U70 411 aaPredicted RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 TMEM40Q8WWA1 233 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 RPL10LQ96L21 214 aaKnown RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 ZNF512Q96ME7 567 aaPredicted RBP17.4■□□□□ 0.38
VAC14-210ENST00000568548 ULBP1Q9BZM6 244 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 WDR41Q9HAD4 459 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 TNFRSF12AQ9NP84 129 aa17.4■□□□□ 0.38
VAC14-210ENST00000568548 TTC24A2A3L6 582 aaPredicted RBP17.39■□□□□ 0.37
VAC14-210ENST00000568548 GRID2O43424 1007 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 PCSK6P29122 969 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 TPI1P60174 286 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 LSAMPQ13449 338 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 BNC2Q6ZN30 1099 aaPredicted RBP17.39■□□□□ 0.37
VAC14-210ENST00000568548 APPL2Q8NEU8 664 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 RNF34Q969K3 372 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 PHF21BQ96EK2 531 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 FERMT1Q9BQL6 677 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 SMIM28A0A1B0GU29 152 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 AHSGP02765 367 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 SMIM18P0DKX4 95 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 TMED1Q13445 227 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 LAMC2Q13753 1193 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 DGKDQ16760 1214 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 IL23RQ5VWK5 629 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 KLHDC10Q6PID8 442 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 PSTKQ8IV42 348 aaKnown RBP17.39■□□□□ 0.37
VAC14-210ENST00000568548 BEST2Q8NFU1 509 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 OR9I1Q8NGQ6 314 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 CCDC167Q9P0B6 97 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
VAC14-210ENST00000568548 PLXNA1Q9UIW2 1896 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 H3BSA7 217 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 PFDN1O60925 122 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 PMPCBO75439 489 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 RNASEH2AO75792 299 aaKnown RBP17.38■□□□□ 0.37
VAC14-210ENST00000568548 ETFBP38117 255 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 CHRNA4P43681 627 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 RPL14P50914 215 aaKnown RBP17.38■□□□□ 0.37
VAC14-210ENST00000568548 SEPT6Q14141 434 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 PCSK7Q16549 785 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 FBXO48Q5FWF7 155 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 SH2D4BQ5SQS7 431 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 KIAA0319Q5VV43 1072 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 MFSD6LQ8IWD5 586 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 TMIGD2Q96BF3 282 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 C16orf70Q9BSU1 422 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 COMMD3-BMI1R4GMX3 469 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 SHROOM3Q8TF72 1996 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 RGSL1A5PLK6 1076 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 MATN2O00339 956 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 PABPC4LP0CB38 370 aaKnown RBP17.38■□□□□ 0.37
VAC14-210ENST00000568548 PRAMEP78395 509 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 MYBPC1Q00872 1141 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 MYLK3Q32MK0 819 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 ESRP1Q6NXG1 681 aaKnown RBP17.38■□□□□ 0.37
VAC14-210ENST00000568548 MAMDC4Q6UXC1 1216 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 B3GALNT2Q8NCR0 500 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 DIS3LQ8TF46 1054 aaKnown RBP17.38■□□□□ 0.37
VAC14-210ENST00000568548 JADE3Q92613 823 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 EXT2Q93063 718 aa17.38■□□□□ 0.37
VAC14-210ENST00000568548 RTKNQ9BST9 563 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms