RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ADI1Q9BV57 179 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 SACM1LQ9NTJ5 587 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 UTP6Q9NYH9 597 aaKnown RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 TSPAN3O60637 253 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 NCK1P16333 377 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 SERPINB10P48595 397 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 ATG14Q6ZNE5 492 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 TAS2R42Q7RTR8 314 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 MIER2Q8N344 545 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 WDR83Q9BRX9 315 aaKnown RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 VPS45Q9NRW7 570 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 ZDHHC2Q9UIJ5 367 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 CSADQ9Y600 493 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 MYO1GB0I1T2 1018 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 H3BNX3 289 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 DENRO43583 198 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 MGEA5O60502 916 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 VDRP11473 427 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 PORP16435 677 aaPredicted RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 TGFB2P61812 414 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SLC25A11Q02978 314 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 HNRNPDQ14103 355 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 TMEM132DQ14C87 1099 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 CLEC6AQ6EIG7 209 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 P2RY11Q96G91 374 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 CPB2Q96IY4 423 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 RPL10LQ96L21 214 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 C9orf16Q9BUW7 83 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 C6orf62Q9GZU0 229 aaPredicted RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 TUT1Q9H6E5 874 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 EPS8L2Q9H6S3 715 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 HMG20AQ9NP66 347 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 FAIMQ9NVQ4 179 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 HMGXB4Q9UGU5 601 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SQORQ9Y6N5 450 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 A0A0A0MRY4 1105 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 A8MU76 341 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 E7ESA3 106 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 B4GALT5O43286 388 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 EPHX2P34913 555 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 HOXD12P35452 270 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 TCF7P36402 384 aaPredicted RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 BCAP31P51572 246 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 VPS26BQ4G0F5 336 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SNX29P2Q8IUI4 249 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 ZC3H7AQ8IWR0 971 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 SYTL1Q8IYJ3 562 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 CDC26Q8NHZ8 85 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SIGLEC10Q96LC7 697 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SPATA13Q96N96 652 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 THUMPD3Q9BV44 507 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 TRIM39Q9HCM9 518 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 OAZ3Q9UMX2 235 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 EFR3BQ9Y2G0 817 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 HES2Q9Y543 173 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 CEPT1Q9Y6K0 416 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 RGPD5Q99666 1765 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 FUOMA2VDF0 154 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SLCO1B7G3V0H7 640 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 EI24O14681 340 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 NRP1O14786 923 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 NFICP08651 508 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 IL5RAQ01344 420 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 AARS2Q5JTZ9 985 aaKnown RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 LIPMQ5VYY2 423 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 METTL21CQ5VZV1 264 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 DNAJC14Q6Y2X3 702 aaPredicted RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 LILRA2Q8N149 483 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
PALB2-206ENST00000568219 NXNL1Q96CM4 212 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SLC25A23Q9BV35 468 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 SPATA7Q9P0W8 599 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 HSFX1Q9UBD0 423 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 UBIAD1Q9Y5Z9 338 aa11.05□□□□□ -0.64
PALB2-206ENST00000568219 APOA4P06727 396 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 GNAO1P09471 354 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 CES1P23141 567 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 KCNK10P57789 538 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ADAM17P78536 824 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 GTF2H3Q13889 308 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 GRM3Q14832 879 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ZBED5Q49AG3 693 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ZNF470Q6ECI4 717 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 SFRP1Q8N474 314 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 PIWIL1Q96J94 861 aaKnown RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 PEBP4Q96S96 227 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 HERC2P3Q9BVR0 1158 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 REXO4Q9GZR2 422 aaKnown RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 POLE4Q9NR33 117 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ZDHHC7Q9NXF8 308 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 VTI1BQ9UEU0 232 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 NDUFAF1Q9Y375 327 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 COPG1Q9Y678 874 aaKnown RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 COQ9O75208 318 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 ENTPD3O75355 529 aa11.04□□□□□ -0.64
PALB2-206ENST00000568219 NADKO95544 446 aaPredicted RBP11.04□□□□□ -0.64
PALB2-206ENST00000568219 CHEK2O96017 543 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms