RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 SLCO3A1Q9UIG8 710 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 hCG_1818297A0A087WSY0 165 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 C1QTNF3-AMACRE9PGA6 284 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 PPP1R12AO14974 1030 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-208ENST00000567250 SIN3BO75182 1162 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 TMCC1O94876 653 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 IGSF6O95976 241 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 GSRP00390 522 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 DNTTP04053 509 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 GABRG2P18507 467 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 TGM2P21980 687 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 PTPN7P35236 360 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 SNRPD1P62314 119 aaKnown RBP12.4□□□□□ -0.42
SF3B3-208ENST00000567250 USP39Q53GS9 565 aaKnown RBP12.4□□□□□ -0.42
SF3B3-208ENST00000567250 SEL1L2Q5TEA6 688 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 CCDC181Q5TID7 509 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 HEATR6Q6AI08 1181 aaKnown RBP12.4□□□□□ -0.42
SF3B3-208ENST00000567250 KIAA1324Q6UXG2 1013 aaKnown RBP12.4□□□□□ -0.42
SF3B3-208ENST00000567250 Q6ZVU0 165 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 PLD5Q8N7P1 536 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 SIPA1Q96FS4 1042 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 HES6Q96HZ4 224 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 MRGPRX1Q96LB2 322 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 GDAP1L1Q96MZ0 367 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 RSPH9Q9H1X1 276 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-208ENST00000567250 PDFQ9HBH1 243 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 CD248Q9HCU0 757 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 EFR3BQ9Y2G0 817 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 FCF1Q9Y324 198 aaKnown RBP12.4□□□□□ -0.42
SF3B3-208ENST00000567250 ANKRD36A6QL64 1941 aa12.4□□□□□ -0.42
SF3B3-208ENST00000567250 H0Y858 1186 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 BNIP3LO60238 219 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 KIF5CO60282 957 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 NEBLO76041 1014 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 ADH1BP00325 375 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 MT-CO1P00395 513 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 PRNPP04156 253 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 HSPA9P38646 679 aaKnown RBP12.39□□□□□ -0.43
SF3B3-208ENST00000567250 GARSP41250 739 aaKnown RBP12.39□□□□□ -0.43
SF3B3-208ENST00000567250 NR2C2P49116 596 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 FNTBP49356 437 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 COPAP53621 1224 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 RHOAP61586 193 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 DYNLT1P63172 113 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 RAD51Q06609 339 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 GALNT2Q10471 571 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 TCF15Q12870 199 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 ZNF235Q14590 738 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 PDK1Q15118 436 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 TAZQ16635 292 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 C9orf64Q5T6V5 341 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 FAM46CQ5VWP2 391 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 KAZNQ674X7 775 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 TMPRSS6Q8IU80 811 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 PLPP6Q8IY26 295 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 PQLC3Q8N755 202 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 ZBTB44Q8NCP5 570 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 FRS2Q8WU20 508 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 P3H4Q92791 437 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 NELL1Q92832 810 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 PTPRN2Q92932 1015 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 HDAC11Q96DB2 347 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 PPP1R16AQ96I34 528 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 CINPQ9BW66 212 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-208ENST00000567250 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 MKRN2Q9H000 416 aaKnown RBP12.39□□□□□ -0.43
SF3B3-208ENST00000567250 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 PACSIN2Q9UNF0 486 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-208ENST00000567250 MFHAS1Q9Y4C4 1052 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-208ENST00000567250 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
SF3B3-208ENST00000567250 J3KR12 359 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 APOC4-APOC2K7ER74 178 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 K7ERQ8 282 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 MCF2LO15068 1137 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CST8O60676 142 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
SF3B3-208ENST00000567250 ZNF189O75820 626 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-208ENST00000567250 TJP3O95049 919 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CD160O95971 181 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 IL1BP01584 269 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 APOC2P02655 101 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 MAPK8P45983 427 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 PXNP49023 591 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-208ENST00000567250 PEX5P50542 639 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 DNA2P51530 1060 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 RENBPP51606 427 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 GBE1Q04446 702 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 ZNF33AQ06730 810 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CCDC15Q0P6D6 951 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 LBRQ14739 615 aaKnown RBP12.38□□□□□ -0.43
SF3B3-208ENST00000567250 GRM3Q14832 879 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 RPS6KA1Q15418 735 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CST6Q15828 149 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CARD16Q5EG05 197 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 MEI1Q5TIA1 1274 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 BBS12Q6ZW61 710 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 KBTBD6Q86V97 674 aa12.38□□□□□ -0.43
SF3B3-208ENST00000567250 CACUL1Q86Y37 369 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms