RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 LINGO4Q6UY18 593 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 PYROXD2Q8N2H3 581 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 PCDH20Q8N6Y1 951 aaKnown RBP12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 OR2I1PQ8NGU4 316 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 ARHGEF2Q92974 986 aaKnown RBP12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 EIF3CQ99613 913 aaKnown RBP12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 EPAS1Q99814 870 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 NCAPGQ9BPX3 1015 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 DONSONQ9NYP3 566 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 HPCAL4Q9UM19 191 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 SLCO1B1Q9Y6L6 691 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 SPEGQ15772 3267 aa12.91□□□□□ -0.34
LPCAT4-206ENST00000566581 SHROOM3Q8TF72 1996 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3DA0A087WVF3 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3IA0A087WXS9 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3EA0A087X179 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3KA0A087X1G2 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 A0A1B0GVT2 93 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3FA6NER0 549 aaPredicted RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 ZSCAN5CA6NGD5 496 aaPredicted RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3LB9A6J9 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 GIPC1O14908 333 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 RAMP2O60895 175 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 CD160O95971 181 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 SERPING1P05155 500 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 CTSLP07711 333 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3HP0C7X1 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 PSMA2P25787 234 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 EPHB2P29323 1055 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 ACVRL1P37023 503 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 RECQLP46063 649 aaPredicted RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 YBEYP58557 167 aaPredicted RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 ARF5P84085 180 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 HNRNPDQ14103 355 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 POLD3Q15054 466 aaPredicted RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 HLA-BQ31612 363 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 AGBL4Q5VU57 503 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3GQ6DHY5 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3CQ6IPX1 549 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 TBC1D3Q8IZP1 549 aaPredicted RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 RTL3Q8N8U3 475 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 GAREM1Q9H706 876 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 CATSPERBQ9H7T0 1116 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 EBF2Q9HAK2 575 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 MRPL47Q9HD33 250 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 IFNKQ9P0W0 207 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 CNOT8Q9UFF9 292 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 ANKRD6Q9Y2G4 727 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 SCINQ9Y6U3 715 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 FRYQ5TBA9 3013 aa12.9□□□□□ -0.34
LPCAT4-206ENST00000566581 VILLO15195 856 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 FGF10O15520 208 aaPredicted RBP12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 KDELR3O43731 214 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 BNIP3LO60238 219 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 DFNA5O60443 496 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 RNF8O76064 485 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 TPM3P06753 285 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 PMLP29590 882 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 SHC2P98077 582 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 ACAP1Q15027 740 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 CARD16Q5EG05 197 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 ERMARDQ5T6L9 678 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 DPY19L3Q6ZPD9 716 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 VPS36Q86VN1 386 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 TRIM69Q86WT6 500 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 PSTKQ8IV42 348 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 UMODL1-AS1Q8N2C9 162 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 SKA1Q96BD8 255 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 HDAC8Q9BY41 377 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 TNKS2Q9H2K2 1166 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 NOL6Q9H6R4 1146 aaKnown RBP12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 PREBQ9HCU5 417 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 IL36AQ9UHA7 158 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 PCDHGB2Q9Y5G2 931 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 LRRK1Q38SD2 2015 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 PTPRBP23467 1997 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 AKAP13Q12802 2813 aa12.89□□□□□ -0.35
LPCAT4-206ENST00000566581 PLK4O00444 970 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 KPNA3O00505 521 aaPredicted RBP12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 CREB3O43889 395 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 GYPCP04921 128 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 KCNA4P22459 653 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 HNRNPH3P31942 346 aaKnown RBP12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 CTSKP43235 329 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 ZNF135P52742 658 aaPredicted RBP12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 TAS2R38P59533 333 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 KIF19Q2TAC6 998 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 PARP15Q460N3 678 aa12.88□□□□□ -0.35
LPCAT4-206ENST00000566581 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms