RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PRNPP04156 253 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 MYF5P13349 255 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 RBMS1P29558 406 aaKnown RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 CSRP3P50461 194 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 CDH4P55283 916 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 ZNF177Q13360 481 aaPredicted RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 KYAT3Q6YP21 454 aaKnown RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 ERN2Q76MJ5 926 aaKnown RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 ZSCAN30Q86W11 494 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 ZNF548Q8NEK5 533 aaPredicted RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 ZNF606Q8WXB4 792 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 KLK6Q92876 244 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 ATXN7L3BQ96GX2 97 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 RPRD1AQ96P16 312 aaPredicted RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 PSMB7Q99436 277 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 SLC17A9Q9BYT1 436 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 GTPBP4Q9BZE4 634 aaKnown RBP13.06□□□□□ -0.32
RNF40-208ENST00000565995 OSBPL2Q9H1P3 480 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 GOLPH3LQ9H4A5 285 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 CAAP1Q9H8G2 361 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 FZD3Q9NPG1 666 aa13.06□□□□□ -0.32
RNF40-208ENST00000565995 POM121BA6NF01 834 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 AP1G1O43747 822 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 ZNF821O75541 412 aaPredicted RBP13.05□□□□□ -0.32
RNF40-208ENST00000565995 NEBLO76041 1014 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 NUMBP49757 651 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 IRAK1P51617 712 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 CLCN6P51797 869 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 CLDN2P57739 230 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 RPS21P63220 83 aaKnown RBP13.05□□□□□ -0.32
RNF40-208ENST00000565995 KRT83P78385 493 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 CDK17Q00537 523 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 CENPCQ03188 943 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 CETN1Q12798 172 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 FGL2Q14314 439 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 TAF5Q15542 800 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 C3orf38Q5JPI3 329 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 KIAA1161Q6NSJ0 714 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 DENND1BQ6P3S1 775 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 FOXR2Q6PJQ5 311 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 CCDC81Q6ZN84 652 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 RRAGAQ7L523 313 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 ARHGEF19Q8IW93 802 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 WDR36Q8NI36 951 aaKnown RBP13.05□□□□□ -0.32
RNF40-208ENST00000565995 ASB12Q8WXK4 309 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 RNF34Q969K3 372 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 CEP63Q96MT8 703 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 MYOCQ99972 504 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 BOCQ9BWV1 1114 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 DNAJC28Q9NX36 388 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 KLF15Q9UIH9 416 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 VPS28Q9UK41 221 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 VANGL2Q9ULK5 521 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 HS3ST4Q9Y661 456 aa13.05□□□□□ -0.32
RNF40-208ENST00000565995 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 H3BM21 787 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 KPNA3O00505 521 aaPredicted RBP13.04□□□□□ -0.32
RNF40-208ENST00000565995 EFSO43281 561 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 AQP9O43315 295 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 MED7O43513 233 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 SMAD6O43541 496 aaKnown RBP13.04□□□□□ -0.32
RNF40-208ENST00000565995 SLC28A2O43868 658 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 PCDH8O95206 1070 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 PTMSP20962 102 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 RABIFP47224 123 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 CLN3Q13286 438 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 PNOCQ13519 176 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 EFHC1Q5JVL4 640 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 KIAA1614Q5VZ46 1190 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 SMYD5Q6GMV2 418 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 RBM44Q6ZP01 1051 aaKnown RBP13.04□□□□□ -0.32
RNF40-208ENST00000565995 SETD3Q86TU7 594 aaPredicted RBP13.04□□□□□ -0.32
RNF40-208ENST00000565995 PARGQ86W56 976 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 ZNF683Q8IZ20 524 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 ARL14Q8N4G2 192 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 CCDC34Q96HJ3 373 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 FEM1CQ96JP0 617 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 TBATAQ96M53 351 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 KLF6Q99612 283 aaPredicted RBP13.04□□□□□ -0.32
RNF40-208ENST00000565995 C2orf49Q9BVC5 232 aaPredicted RBP13.04□□□□□ -0.32
RNF40-208ENST00000565995 DYRK4Q9NR20 520 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 DDIT4Q9NX09 232 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 IL36AQ9UHA7 158 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 VPS51Q9UID3 782 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 ACSL6Q9UKU0 697 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
RNF40-208ENST00000565995 CXorf51AA0A1B0GTR3 108 aa13.03□□□□□ -0.32
RNF40-208ENST00000565995 DRGXA6NNA5 263 aa13.03□□□□□ -0.32
RNF40-208ENST00000565995 K7ERQ8 282 aa13.03□□□□□ -0.32
RNF40-208ENST00000565995 HSF2BPO75031 334 aa13.03□□□□□ -0.32
RNF40-208ENST00000565995 PAGE1O75459 146 aa13.03□□□□□ -0.32
RNF40-208ENST00000565995 PAK4O96013 591 aaPredicted RBP13.03□□□□□ -0.32
RNF40-208ENST00000565995 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
RNF40-208ENST00000565995 L1CAMP32004 1257 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms