RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 FBRSL1Q9HCM7 1045 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 RBM12Q9NTZ6 932 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 SUN2Q9UH99 717 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 AMACRQ9UHK6 382 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 NDRG2Q9UN36 371 aaKnown RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 HS3ST2Q9Y278 367 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 FARP1Q9Y4F1 1045 aaPredicted RBP7.93□□□□□ -1.14
CDH1-208ENST00000565810 TTLL3Q9Y4R7 772 aa7.93□□□□□ -1.14
CDH1-208ENST00000565810 OBSL1O75147 1896 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 DENND4AQ7Z401 1863 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 DOCK8Q8NF50 2099 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 KANSL1LA0AUZ9 987 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 GOLGA6CA6NDK9 693 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 GOLGA6BA6NDN3 693 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 C5orf60A6NFR6 353 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 K7EQS6 105 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 RNF103O00237 685 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 ATP9BO43861 1147 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 SYNCRIPO60506 623 aaKnown RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 OPHN1O60890 802 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 GCATO75600 419 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 IGSF6O95976 241 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 MT-CO1P00395 513 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 EGFP01133 1207 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 KRT14P02533 472 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 GOLGA6DP0CG33 693 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 SRCP12931 536 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 VAV1P15498 845 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 PTPN3P26045 913 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 TIE1P35590 1138 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 CTSOP43234 321 aaPredicted RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 TNNT3P45378 269 aaPredicted RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 SEC13P55735 322 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 STARD6P59095 220 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 RHOAP61586 193 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 TUBB4BP68371 445 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 ZXDAP98168 799 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 DR1Q01658 176 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 RAD51Q06609 339 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 NSUN2Q08J23 767 aaKnown RBP eCLIP7.92□□□□□ -1.14
CDH1-208ENST00000565810 SLC10A7Q0GE19 358 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 PRPSAP1Q14558 356 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 UBXN2BQ14CS0 331 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 CYTH1Q15438 398 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 DLG2Q15700 870 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 P3H1Q32P28 736 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 HSF5Q4G112 596 aaPredicted RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 IER5LQ5T953 404 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 FSTL4Q6MZW2 842 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 SERPINA13PQ6UXR4 307 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 ARHGEF18Q6ZSZ5 1173 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 SIX5Q8N196 739 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 SYNPOQ8N3V7 929 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 RYBPQ8N488 228 aaPredicted RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 TEX26Q8N6G2 289 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 ALLCQ8N6M5 410 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 PCDH20Q8N6Y1 951 aaKnown RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 SORCS1Q8WY21 1168 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 ISG20Q96AZ6 181 aaKnown RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 LRRC45Q96CN5 670 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 TEKT5Q96M29 485 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 SPATA13Q96N96 652 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 AGAP3Q96P47 875 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 NECAB3Q96P71 396 aaPredicted RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 PPP1R2P1Q96PQ5 205 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 PSKH2Q96QS6 385 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 IL12RB2Q99665 862 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 POLR1EQ9GZS1 481 aaKnown RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 MFSD1Q9H3U5 465 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 LMAN1LQ9HAT1 526 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 PDFQ9HBH1 243 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 USP29Q9HBJ7 922 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 NT5MQ9NPB1 228 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 GOLGA6AQ9NYA3 693 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 PAK5Q9P286 719 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 THAP10Q9P2Z0 257 aaPredicted RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 PCYOX1Q9UHG3 505 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 SLCO3A1Q9UIG8 710 aa7.92□□□□□ -1.14
CDH1-208ENST00000565810 FCF1Q9Y324 198 aaKnown RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 NUP210Q8TEM1 1887 aaPredicted RBP7.92□□□□□ -1.14
CDH1-208ENST00000565810 DENND4CQ5VZ89 1909 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 VCANP13611 3396 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 EDDM13A0A1B0GTR0 161 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 TARSL2A2RTX5 802 aaKnown RBP7.91□□□□□ -1.14
CDH1-208ENST00000565810 KRBA1A5PL33 1030 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 FAM187AA6NFU0 413 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 K7ERQ8 282 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 NDC80O14777 642 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 ZBTB24O43167 697 aaPredicted RBP7.91□□□□□ -1.14
CDH1-208ENST00000565810 DCXO43602 365 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 BNIP3LO60238 219 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 ATG13O75143 517 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 SLU7O95391 586 aaKnown RBP7.91□□□□□ -1.14
CDH1-208ENST00000565810 CD160O95971 181 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 PEX11BO96011 259 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 GSRP00390 522 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 ALADP13716 330 aa7.91□□□□□ -1.14
CDH1-208ENST00000565810 HNRNPLP14866 589 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDH1-208ENST00000565810 CD72P21854 359 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms