RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 RAB7BQ96AH8 199 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 SPON2Q9BUD6 331 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 HDAC8Q9BY41 377 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 MTG2Q9H4K7 406 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 ERVMER34-1Q9H9K5 563 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 AASDHPPTQ9NRN7 309 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 SERGEFQ9UGK8 458 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 PCNX2A6NKB5 2137 aa17.08■□□□□ 0.33
USB1-211ENST00000565662 A0A0D9SEW6 157 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 TCRBV5S1A1TA0A578 114 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 WASH4PA8MWX3 477 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 PRAMEF26H0Y7S4 382 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 KPNA3O00505 521 aaPredicted RBP17.08■□□□□ 0.32
USB1-211ENST00000565662 TEX33O43247 280 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 CCP110O43303 1012 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 RTN2O75298 545 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 GSRP00390 522 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 CDK4P11802 303 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 ITGB7P26010 798 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 EPHB2P29323 1055 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 CTSKP43235 329 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 CSNK1EP49674 416 aaKnown RBP17.08■□□□□ 0.32
USB1-211ENST00000565662 NEK3P51956 506 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 TRIP6Q15654 476 aaKnown RBP17.08■□□□□ 0.32
USB1-211ENST00000565662 AGBL4Q5VU57 503 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 PLEKHA7Q6IQ23 1121 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.08■□□□□ 0.32
USB1-211ENST00000565662 DBX2Q6ZNG2 339 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 TMC6Q7Z403 805 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 DRC7Q8IY82 874 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 RTL3Q8N8U3 475 aaKnown RBP17.08■□□□□ 0.32
USB1-211ENST00000565662 MFSD2AQ8NA29 543 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 SERAC1Q96JX3 654 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 HEPHQ9BQS7 1158 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 SYT11Q9BT88 431 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 TTYH3Q9C0H2 523 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 LCMT1Q9UIC8 334 aa17.08■□□□□ 0.32
USB1-211ENST00000565662 TP53BP1Q12888 1972 aaPredicted RBP17.08■□□□□ 0.32
USB1-211ENST00000565662 SYCE3A1L190 88 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 AP1G1O43747 822 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 SNAP91O60641 907 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 RRM1P23921 792 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 STAT4Q14765 748 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 NR1I3Q14994 352 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 INO80DQ53TQ3 878 aaPredicted RBP17.07■□□□□ 0.32
USB1-211ENST00000565662 CARD16Q5EG05 197 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 KIAA1161Q6NSJ0 714 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 SCYL2Q6P3W7 929 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 ERN2Q76MJ5 926 aaKnown RBP17.07■□□□□ 0.32
USB1-211ENST00000565662 OR7D4Q8NG98 312 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 ARHGEF2Q92974 986 aaKnown RBP17.07■□□□□ 0.32
USB1-211ENST00000565662 HAUS4Q9H6D7 363 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 PCOLCE2Q9UKZ9 415 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 NEUROG3Q9Y4Z2 214 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 PLXNA2O75051 1894 aa17.07■□□□□ 0.32
USB1-211ENST00000565662 COL5A1P20908 1838 aaPredicted RBP17.07■□□□□ 0.32
USB1-211ENST00000565662 RIOK3O14730 519 aaKnown RBP17.06■□□□□ 0.32
USB1-211ENST00000565662 BNIP3LO60238 219 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 ZMPSTE24O75844 475 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 VAV1P15498 845 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 PSMA2P25787 234 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 AKT2P31751 481 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 SUOXP51687 545 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 UBASH3AP57075 661 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 CNTN1Q12860 1018 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 KIF19Q2TAC6 998 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 TDRD12Q587J7 1177 aaKnown RBP17.06■□□□□ 0.32
USB1-211ENST00000565662 ZNF354CQ86Y25 554 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 DCP2Q8IU60 420 aaKnown RBP17.06■□□□□ 0.32
USB1-211ENST00000565662 CCDC185Q8N715 623 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 OR2AP1Q8NGE2 309 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 SETD7Q8WTS6 366 aaKnown RBP17.06■□□□□ 0.32
USB1-211ENST00000565662 ELF4Q99607 663 aaPredicted RBP17.06■□□□□ 0.32
USB1-211ENST00000565662 ORAI3Q9BRQ5 295 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 FSCN3Q9NQT6 498 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 FZD10Q9ULW2 581 aa17.06■□□□□ 0.32
USB1-211ENST00000565662 KDELR3O43731 214 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 SH3BP5O60239 455 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 IGSF6O95976 241 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 MT-CO1P00395 513 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 CCNHP51946 323 aaPredicted RBP17.05■□□□□ 0.32
USB1-211ENST00000565662 NDST2P52849 883 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 TPI1P60174 286 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 ARF5P84085 180 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 ZBED6P86452 979 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 FANCCQ00597 558 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 FOXC1Q12948 553 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 MAMLD1Q13495 774 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 TRIM14Q14142 442 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 PIP5KL1Q5T9C9 394 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 TMCO4Q5TGY1 634 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 DPY19L3Q6ZPD9 716 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 UMODL1-AS1Q8N2C9 162 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 GDAP1L1Q96MZ0 367 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 SLC6A18Q96N87 628 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 CBX8Q9HC52 389 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 TMPRSS4Q9NRS4 437 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 DNAI1Q9UI46 699 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 SARDHQ9UL12 918 aa17.05■□□□□ 0.32
USB1-211ENST00000565662 AP4E1Q9UPM8 1137 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms