RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ELMSAN1Q6PJG2 1045 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 LCLAT1Q6UWP7 414 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FSTL5Q8N475 847 aaPredicted RBP20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 THAP11Q96EK4 314 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GMLQ99445 158 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ZBTB26Q9HCK0 441 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ACKR2O00590 384 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ZNF189O75820 626 aaPredicted RBP20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CD247P20963 164 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 BACE1P56817 501 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 KCNMB4Q86W47 210 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DENND6AQ8IWF6 608 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CANT1Q8WVQ1 401 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CYGBQ8WWM9 190 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 VPS33BQ9H267 617 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CIDEBQ9UHD4 219 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NME7Q9Y5B8 376 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ARID2Q68CP9 1835 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 A0A087WZ62 844 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PSMD12O00232 456 aaPredicted RBP20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 VTNP04004 478 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SBK3P0C264 359 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PRDX6P30041 224 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CDK9P50750 372 aaKnown RBP20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PRPSAP1Q14558 356 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 INSCQ1MX18 579 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 IER5Q5VY09 327 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 XRRA1Q6P2D8 792 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NXNL1Q96CM4 212 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 KIF12Q96FN5 646 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 LRCH3Q96II8 777 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FDXACB1Q9BRP7 624 aaPredicted RBP20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TEX13BQ9BXU2 312 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SLC2A11Q9BYW1 496 aa20.8■□□□□ 0.92
MAP1LC3B-206ENST00000564844 H3BNH8 94 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ATE1O95260 518 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SETSIPP0DME0 302 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TTC33Q6PID6 262 aaPredicted RBP20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GPR141Q7Z602 305 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CTU1Q7Z7A3 348 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 LSMEM2Q8N112 164 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FIBCD1Q8N539 461 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SLCO4A1Q96BD0 722 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FTHL17Q9BXU8 183 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SELENONQ9NZV5 590 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SH3GLB1Q9Y371 365 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 C9IYK1 514 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ARIH2O95376 493 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 COL6A2P12110 1019 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 BNIP3Q12983 259 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TMEM132DQ14C87 1099 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NEDD8Q15843 81 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 METTL21CQ5VZV1 264 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 HMBOX1Q6NT76 420 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SMYD1Q8NB12 490 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TSNARE1Q96NA8 513 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FBRSL1Q9HCM7 1045 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TNFRSF12AQ9NP84 129 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DPP3Q9NY33 737 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 BFARQ9NZS9 450 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 MDM4O15151 490 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 HTRA2O43464 458 aaPredicted RBP20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DLX3O60479 287 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 BAG6P46379 1132 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GJA9P57773 515 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TRIM25Q14258 630 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DPYSL2Q16555 572 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 IFNEQ86WN2 208 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ISOC1Q96CN7 298 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PHF21BQ96EK2 531 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GIMAP2Q9UG22 337 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 BCAP29Q9UHQ4 241 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PCDHGA7Q9Y5G6 932 aa20.79■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NR4A1P22736 598 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 MPP1Q00013 466 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CD300CQ08708 224 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FGD3Q5JSP0 725 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CHSY3Q70JA7 882 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 RNF168Q8IYW5 571 aaPredicted RBP20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CBR4Q8N4T8 237 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PTPRHQ9HD43 1115 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PLK2Q9NYY3 685 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PGAP2Q9UHJ9 254 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PCDHGA4Q9Y5G9 962 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SNX10Q9Y5X0 201 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 RNF103-CHMP3A0A140T963 221 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TRIM38O00635 465 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SULT1E1P49888 294 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DEFB106AQ8N104 65 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SEPT1Q8WYJ6 367 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DRC3Q9H069 523 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CHST12Q9NRB3 414 aa20.78■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FAM72CH0Y354 149 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ZBTB24O43167 697 aaPredicted RBP20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 RXRGP48443 463 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PLCL1Q15111 1095 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 LDLRAP1Q5SW96 308 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FAM72AQ5TYM5 149 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 LIPMQ5VYY2 423 aa20.77■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FAM72DQ6L9T8 149 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms