RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SGCZQ96LD1 299 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 PPP1R10Q96QC0 940 aaKnown RBP4.62□□□□□ -1.67
CHD9-212ENST00000564641 FRMD8Q9BZ67 464 aaPredicted RBP4.62□□□□□ -1.67
CHD9-212ENST00000564641 Q9N2J8 555 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 ARFGAP3Q9NP61 516 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 TMLHEQ9NVH6 421 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 MDFICQ9P1T7 246 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 PCDHA10Q9Y5I2 948 aa4.62□□□□□ -1.67
CHD9-212ENST00000564641 TCRBV7S3A2A0A539 114 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FAM90A18PA6NE21 464 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FAM90A16PA6NEW6 464 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FAM90A9PA6NNJ1 464 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 SMTNL1A8MU46 457 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FAM90A5PA8MXJ8 464 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 SLC16A5O15375 505 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 RNMTO43148 476 aaKnown RBP4.61□□□□□ -1.67
CHD9-212ENST00000564641 CCNT1O60563 726 aaKnown RBP4.61□□□□□ -1.67
CHD9-212ENST00000564641 SOX30O94993 753 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 ITGA2BP08514 1039 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FAM90A15PP0C7V4 464 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FAM90A14PP0C7W9 464 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 ABCB4P21439 1286 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 PRPH2P23942 346 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 GSTM2P28161 218 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 NUDT6P53370 316 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 PTK2BQ14289 1009 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 SPARCL1Q14515 664 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 STARD3Q14849 445 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 PLCB4Q15147 1175 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 NCAPH2Q6IBW4 605 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 PRSS57Q6UWY2 283 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 H1FNTQ75WM6 255 aaPredicted RBP4.61□□□□□ -1.67
CHD9-212ENST00000564641 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 C16orf82Q7Z2V1 217 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FOXP4Q8IVH2 680 aaPredicted RBP4.61□□□□□ -1.67
CHD9-212ENST00000564641 HORMAD2Q8N7B1 307 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 ZBTB8BQ8NAP8 495 aaPredicted RBP4.61□□□□□ -1.67
CHD9-212ENST00000564641 SLC2A12Q8TD20 617 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 PARD3BQ8TEW8 1205 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 HDAC7Q8WUI4 952 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 CPT1BQ92523 772 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 EID2BQ96D98 161 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 RTKNQ9BST9 563 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 IFT27Q9BW83 186 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 TRIM31Q9BZY9 425 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.61□□□□□ -1.67
CHD9-212ENST00000564641 TMEM248Q9NWD8 314 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 BAG5Q9UL15 447 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 RIPOR2Q9Y4F9 1068 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 RAI2Q9Y5P3 530 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 FHOD3Q2V2M9 1422 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 PTPRMP28827 1452 aa4.61□□□□□ -1.67
CHD9-212ENST00000564641 PCF11O94913 1555 aaKnown RBP4.61□□□□□ -1.67
CHD9-212ENST00000564641 AGAP5A6NIR3 686 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 FFAR2O15552 330 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 HNRNPRO43390 633 aaKnown RBP4.6□□□□□ -1.67
CHD9-212ENST00000564641 ZNF432O94892 652 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 NAGAP17050 411 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 AMTP48728 403 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 CDK18Q07002 472 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 BTBD16Q32M84 506 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 KRTAP27-1Q3LI81 207 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 EFHC1Q5JVL4 640 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 C9orf57Q5W0N0 161 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 TMEM71Q6P5X7 295 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 FAM186BQ8IYM0 893 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 HES6Q96HZ4 224 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 APOLD1Q96LR9 279 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 GFM1Q96RP9 751 aaKnown RBP4.6□□□□□ -1.67
CHD9-212ENST00000564641 PIGSQ96S52 555 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 CHST12Q9NRB3 414 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 SEL1LQ9UBV2 794 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 KCNG2Q9UJ96 466 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 ARHGEF40Q8TER5 1519 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 HECW1Q76N89 1606 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 ADAMTSL3P82987 1691 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 BCORL1Q5H9F3 1711 aa4.6□□□□□ -1.67
CHD9-212ENST00000564641 TRIP12Q14669 1992 aaPredicted RBP4.6□□□□□ -1.67
CHD9-212ENST00000564641 PRSS47A8MTI9 375 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 CAMTA2O94983 1202 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 PPP1R3DO95685 299 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 MYL1P05976 194 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 DAOP14920 347 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 PPP3CCP48454 512 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 NUP153P49790 1475 aaKnown RBP4.59□□□□□ -1.67
CHD9-212ENST00000564641 CLCNKBP51801 687 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 PMS2P54278 862 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 CDH12P55289 794 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 ERVFC1-1P60608 527 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 MST1RQ04912 1400 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 COASYQ13057 564 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 KIF19Q2TAC6 998 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 ZMYM4Q5VZL5 1548 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 ZNF518AQ6AHZ1 1483 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 AADACL2Q6P093 401 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 ZFYVE16Q7Z3T8 1539 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 SRLQ86TD4 932 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 FJX1Q86VR8 437 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 TCP11L2Q8N4U5 519 aa4.59□□□□□ -1.67
CHD9-212ENST00000564641 FAR1Q8WVX9 515 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms