RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PRSS45Q7RTY3 260 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 ANKRD52Q8NB46 1076 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 METTL6Q8TCB7 284 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 SAAL1Q96ER3 474 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 CXorf56Q9H5V9 222 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 ACTR5Q9H9F9 607 aaPredicted RBP5.02□□□□□ -1.61
LINC00560-201ENST00000564593 PAPOLBQ9NRJ5 636 aaKnown RBP5.02□□□□□ -1.61
LINC00560-201ENST00000564593 ATP8A2Q9NTI2 1148 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 TERF2IPQ9NYB0 399 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 MPP6Q9NZW5 540 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 C11orf21Q9P2W6 132 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 FBXO40Q9UH90 709 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 CLDN16Q9Y5I7 305 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 TDRD9Q8NDG6 1382 aaKnown RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 MST1RQ04912 1400 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 PABPN1LA6NDY0 278 aaKnown RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 TNFSF14O43557 240 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 ATP5F1P24539 256 aaPredicted RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 ARL1P40616 181 aaPredicted RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 POLD2P49005 469 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 RPS13P62277 151 aaKnown RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 NEXNQ0ZGT2 675 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 DCTN2Q13561 401 aaKnown RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 TBCEQ15813 527 aaPredicted RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 SLC9B1Q4ZJI4 515 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 ALG10Q5BKT4 473 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 ALG10BQ5I7T1 473 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 ISM2Q6H9L7 571 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 AAGABQ6PD74 315 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 WDR5BQ86VZ2 330 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 CNGA4Q8IV77 575 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 HDAC7Q8WUI4 952 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 CUL5Q93034 780 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 ZNF419Q96HQ0 510 aaPredicted RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 CLMNQ96JQ2 1002 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 KLHL15Q96M94 604 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 NR1H4Q96RI1 486 aaPredicted RBP5.01□□□□□ -1.61
LINC00560-201ENST00000564593 CHCHD6Q9BRQ6 235 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 AAMDCQ9H7C9 122 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 PLEKHA5Q9HAU0 1116 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 PCDHB16Q9NRJ7 776 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 KRT84Q9NSB2 600 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 TBC1D22BQ9NU19 505 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 TMEM45AQ9NWC5 275 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 BABAM1Q9NWV8 329 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 TBC1D14Q9P2M4 693 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 KDM3AQ9Y4C1 1321 aa5.01□□□□□ -1.61
LINC00560-201ENST00000564593 SMIM35A0A1B0GVV1 85 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 ARHGAP10A1A4S6 786 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 WIPF3A6NGB9 483 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 FOXO6A8MYZ6 492 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 F8W810 466 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 TP73O15350 636 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 PRPF4O43172 522 aaKnown RBP eCLIP5□□□□□ -1.61
LINC00560-201ENST00000564593 TMCC1O94876 653 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 ABCD1P33897 745 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 ARHGAP25P42331 645 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 ZNF91Q05481 1191 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 ERV3-1Q14264 604 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 SMN1Q16637 294 aaKnown RBP5□□□□□ -1.61
LINC00560-201ENST00000564593 MIDNQ504T8 468 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 TTC39AQ5SRH9 613 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 MOB3CQ70IA8 216 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 B4GALNT4Q76KP1 1039 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 TADA2BQ86TJ2 420 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 ZNF575Q86XF7 245 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 DDIASQ8IXT1 998 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 CNTROBQ8N137 903 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 KLHL29Q96CT2 875 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 ZG16BQ96DA0 208 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 SIGLEC11Q96RL6 698 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 BARD1Q99728 777 aaKnown RBP5□□□□□ -1.61
LINC00560-201ENST00000564593 TUBB6Q9BUF5 446 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 HEMGNQ9BXL5 484 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 QTRT1Q9BXR0 403 aaKnown RBP5□□□□□ -1.61
LINC00560-201ENST00000564593 SEMA4CQ9C0C4 833 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 TMX4Q9H1E5 349 aaPredicted RBP5□□□□□ -1.61
LINC00560-201ENST00000564593 ADARB2Q9NS39 739 aaKnown RBP5□□□□□ -1.61
LINC00560-201ENST00000564593 FLRT1Q9NZU1 646 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 CDH22Q9UJ99 828 aa5□□□□□ -1.61
LINC00560-201ENST00000564593 FBXO2Q9UK22 296 aaPredicted RBP5□□□□□ -1.61
LINC00560-201ENST00000564593 ZNF335Q9H4Z2 1342 aaPredicted RBP5□□□□□ -1.61
LINC00560-201ENST00000564593 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 ZBED4O75132 1171 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 TACC1O75410 805 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 RNASEH2AO75792 299 aaKnown RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 CLEC3BP05452 202 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 GALTP07902 379 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 CTSAP10619 480 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 BDNFP23560 247 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 EPHB2P29323 1055 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 FMO4P31512 558 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 SLC16A2P36021 539 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 CTCFP49711 727 aaPredicted RBP4.99□□□□□ -1.61
LINC00560-201ENST00000564593 BLKP51451 505 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 ARSFP54793 590 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 CYP4A11Q02928 519 aa4.99□□□□□ -1.61
LINC00560-201ENST00000564593 DAZAP2Q15038 168 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms