RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GJC1P36383 396 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 CPA2P48052 419 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 POLD2P49005 469 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 CCT4P50991 539 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 FOXG1P55316 489 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 DCAF7P61962 342 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 ARHGAP8P85298 464 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 TBL3Q12788 808 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 LAMB3Q13751 1172 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 MIDNQ504T8 468 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 C10orf25Q5T742 122 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 AADACL2Q6P093 401 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 C16orf54Q6UWD8 224 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 H1FNTQ75WM6 255 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 B4GALNT4Q76KP1 1039 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 CPLX4Q7Z7G2 160 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 CNGA4Q8IV77 575 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 DDIASQ8IXT1 998 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 ADGRF4Q8IZF3 695 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 FAM9BQ8IZU0 186 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 RUFY2Q8WXA3 655 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 IP6K1Q92551 441 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 KAT2AQ92830 837 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 HMCESQ96FZ2 354 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 FRG2BQ96QU4 278 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 FRMD8Q9BZ67 464 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 TMEM45AQ9NWC5 275 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 ARL15Q9NXU5 204 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 SLC8A2Q9UPR5 921 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 SLC45A1Q9Y2W3 748 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 CYP46A1Q9Y6A2 500 aa3.52□□□□□ -1.85
SHCBP1-202ENST00000563219 ZMYM2Q9UBW7 1377 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 TTBK1Q5TCY1 1321 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 CCDC196A0A1B0GTZ2 297 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 ANKRD18BA2A2Z9 1011 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 CXorf65A6NEN9 183 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FAM90A7PA6NKC0 464 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FAM90A22PA8MWA6 464 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FAM90A12PA8MX19 464 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FAM90A23PA8MXZ1 464 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FOXO6A8MYZ6 492 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 SYN3O14994 580 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 AHCYL1O43865 530 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 UGDHO60701 494 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 USO1O60763 962 aaKnown RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 NTN1O95631 604 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 NFATC1O95644 943 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 RRM1P23921 792 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 CHRNA5P30532 468 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 MAPK4P31152 587 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 NUCB1Q02818 461 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 ZNF91Q05481 1191 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 GOLGA8FQ08AF8 430 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 DCTN2Q13561 401 aaKnown RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 ERV3-1Q14264 604 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 GALNT3Q14435 633 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 RABEP1Q15276 862 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 TBCEQ15813 527 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 ARL13AQ5H913 290 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 TTC39AQ5SRH9 613 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 PXDC1Q5TGL8 231 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FAM205BPQ63HN1 556 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 GJB7Q6PEY0 223 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 ATF7IPQ6VMQ6 1270 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 CYB5R4Q7L1T6 521 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FASTKD5Q7L8L6 764 aaKnown RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 RNF144BQ7Z419 303 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 TECPR1Q7Z6L1 1165 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 VPS52Q8N1B4 723 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 PRSS3P2Q8NHM4 247 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 C16orf52Q8NHV5 167 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 NCSTNQ92542 709 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 SH3KBP1Q96B97 665 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 RNFT2Q96EX2 444 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 WDR83Q9BRX9 315 aaKnown RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 WACQ9BTA9 647 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 SCNM1Q9BWG6 230 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 PHF7Q9BWX1 381 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 CTDSP1Q9GZU7 261 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 TAOK3Q9H2K8 898 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 PCDHB16Q9NRJ7 776 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 TMEM184CQ9NVA4 438 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 UPB1Q9UBR1 384 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 FBXO4Q9UKT5 387 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 SUFUQ9UMX1 484 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 NAALADL1Q9UQQ1 740 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 LAMP3Q9UQV4 416 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
SHCBP1-202ENST00000563219 A0A0G2JK05 382 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 TCRBV7S3A2A0A539 114 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 DPPA5A6NC42 116 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 SNAP23O00161 211 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 RHODO00212 210 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 AP3D1O14617 1153 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 DOK2O60496 412 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ZBED4O75132 1171 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 HOXB6P17509 224 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ACTN2P35609 894 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms