RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 ZNF567Q8N184 647 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 CCDC110Q8TBZ0 833 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 USP33Q8TEY7 942 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 TRIM51Q9BSJ1 452 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 CEP41Q9BYV8 373 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 CIPCQ9C0C6 399 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 ELOVL2Q9NXB9 296 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 TRHDEQ9UKU6 1024 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 ERVW-1Q9UQF0 538 aa12.89□□□□□ -0.35
CMTM4-203ENST00000561680 SHISA7A6NL88 538 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 EFCAB8A8MWE9 144 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 TIMM44O43615 452 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 TMCC1O94876 653 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 MT-CO1P00395 513 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 KRT14P02533 472 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 ATP5BP06576 529 aaKnown RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 SRPRAP08240 638 aaKnown RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 DLDP09622 509 aaKnown RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 SRCP12931 536 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 STK19P49842 368 aaPredicted RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 GALK1P51570 392 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 MRPS25P82663 173 aaKnown RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 ZNF235Q14590 738 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 PPP1R7Q15435 360 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 MLF2Q15773 248 aaPredicted RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 TMEM196Q5HYL7 178 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 FAM182AQ5T1J6 154 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 ALG1LQ6GMV1 187 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 PRUNE1Q86TP1 453 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 RNF135Q8IUD6 432 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 SH2D3CQ8N5H7 860 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 CNTD1Q8N815 330 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 SORCS1Q8WY21 1168 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 MYO19Q96H55 970 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 MRGPRX3Q96LB0 322 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 TEKT5Q96M29 485 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 PSKH2Q96QS6 385 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 MGME1Q9BQP7 344 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 LRRC1Q9BTT6 524 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 PAK5Q9P286 719 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 KLHL8Q9P2G9 620 aaPredicted RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 LHX3Q9UBR4 397 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 SEPT3Q9UH03 358 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 ATP8A1Q9Y2Q0 1164 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 ZNF106Q9H2Y7 1883 aaKnown RBP12.88□□□□□ -0.35
CMTM4-203ENST00000561680 TRIOO75962 3097 aa12.88□□□□□ -0.35
CMTM4-203ENST00000561680 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 TBC1D3BA6NDS4 549 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 MUSKO15146 869 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 ZSCAN5DPP0CG00 497 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 CD68P34810 354 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 RPL22P35268 128 aaKnown RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 ACTN2P35609 894 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 HSPA9P38646 679 aaKnown RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 TNFRSF4P43489 277 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 TUBB4BP68371 445 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 PON2Q15165 354 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 CYTH1Q15438 398 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 TRIP13Q15645 432 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 PTPRNQ16849 979 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 KCTD19Q17RG1 926 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 SLC44A4Q53GD3 710 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 ITPRIPL1Q6GPH6 555 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 FSTL4Q6MZW2 842 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 C4orf22Q6V702 233 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 ARHGEF18Q6ZSZ5 1173 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 TPRG1Q6ZUI0 275 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 BBS5Q8N3I7 341 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 PGBD5Q8N414 524 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 KDM1BQ8NB78 822 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 TSEN2Q8NCE0 465 aaKnown RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 CYB5D2Q8WUJ1 264 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 UCMAQ8WVF2 138 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 RPL10LQ96L21 214 aaKnown RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 AGAP3Q96P47 875 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 CINPQ9BW66 212 aaPredicted RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 CEP44Q9C0F1 390 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 GBA3Q9H227 469 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 NT5MQ9NPB1 228 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 HAUS2Q9NVX0 235 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
CMTM4-203ENST00000561680 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
CMTM4-203ENST00000561680 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
CMTM4-203ENST00000561680 TECTAO75443 2155 aa12.86□□□□□ -0.35
CMTM4-203ENST00000561680 K7EQS6 105 aa12.86□□□□□ -0.35
CMTM4-203ENST00000561680 K7ERQ8 282 aa12.86□□□□□ -0.35
CMTM4-203ENST00000561680 ZBTB24O43167 697 aaPredicted RBP12.86□□□□□ -0.35
CMTM4-203ENST00000561680 SMAD6O43541 496 aaKnown RBP12.86□□□□□ -0.35
CMTM4-203ENST00000561680 ATP9BO43861 1147 aa12.86□□□□□ -0.35
CMTM4-203ENST00000561680 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms