RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 FNIP1Q8TF40 1166 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 FRS2Q8WU20 508 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 LOXL4Q96JB6 756 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 EXOC2Q96KP1 924 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 C6orf106Q9H6K1 298 aaPredicted RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 SP110Q9HB58 689 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 VPS45Q9NRW7 570 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TMEM74BQ9NUR3 256 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 CWC15Q9P013 229 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 USP36Q9P275 1121 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 UVRAGQ9P2Y5 699 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 EIF2B4Q9UI10 523 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 CDV3Q9UKY7 258 aaKnown RBP10.33□□□□□ -0.76
HERC1-212ENST00000561348 SARDHQ9UL12 918 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 TFR2Q9UP52 801 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 MFHAS1Q9Y4C4 1052 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 HYOU1Q9Y4L1 999 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 USP34Q70CQ2 3546 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 NUMA1Q14980 2115 aa10.33□□□□□ -0.76
HERC1-212ENST00000561348 MUC22E2RYF6 1773 aaPredicted RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 OTOGLQ3ZCN5 2332 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 KDELR3O43731 214 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 PROSCO94903 275 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 GNSP15586 552 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 C5AR1P21730 350 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 MAT2AP31153 395 aaKnown RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 PCK1P35558 622 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 SERPINH1P50454 418 aaKnown RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 PAPOLAP51003 745 aaKnown RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 GEMIN4P57678 1058 aaKnown RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 RHOAP61586 193 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 IRX4P78413 519 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 LMNB2Q03252 620 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 ZBTB16Q05516 673 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 MMRN1Q13201 1228 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 ACAP1Q15027 740 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 RSPO4Q2I0M5 234 aaPredicted RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 ASTE1Q2TB18 679 aaPredicted RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 CARD16Q5EG05 197 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 NCEH1Q6PIU2 408 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 DPY19L3Q6ZPD9 716 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 SYT12Q8IV01 421 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 AADATQ8N5Z0 425 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 FOXJ1Q92949 421 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 NUSAP1Q9BXS6 441 aaKnown RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 SLC39A8Q9C0K1 460 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 KLC2Q9H0B6 622 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 RXFP3Q9NSD7 469 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 DONSONQ9NYP3 566 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 HECAQ9UBI9 543 aaPredicted RBP10.32□□□□□ -0.76
HERC1-212ENST00000561348 ZNF212Q9UDV6 495 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 IL36AQ9UHA7 158 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 HS3ST2Q9Y278 367 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 PCDHGA5Q9Y5G8 931 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 NUP205Q92621 2012 aa10.32□□□□□ -0.76
HERC1-212ENST00000561348 ARHGAP42A6NI28 874 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 LRRC72A6NJI9 287 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 J3KR12 359 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 MCF2LO15068 1137 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 SPOPO43791 374 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 LEFTY1O75610 366 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 ZMPSTE24O75844 475 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 TMCC1O94876 653 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 PCDH8O95206 1070 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 MAP3K6O95382 1288 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 CD48P09326 243 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 ZNF806P0C7X5 589 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 ID4P47928 161 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 CCNHP51946 323 aaPredicted RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 YBEYP58557 167 aaPredicted RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 TAS2R40P59535 323 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 SNRPD1P62314 119 aaKnown RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 SLC20A2Q08357 652 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 CNTN1Q12860 1018 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 SEMA3BQ13214 749 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 PARP15Q460N3 678 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 TMCO3Q6UWJ1 677 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 ADAT2Q7Z6V5 191 aaKnown RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 KIAA1328Q86T90 577 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 METTL3Q86U44 580 aaKnown RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 RHOT2Q8IXI1 618 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.31□□□□□ -0.76
HERC1-212ENST00000561348 OR2A12Q8NGT7 310 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 KLK6Q92876 244 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 MYOCQ99972 504 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 HEPHQ9BQS7 1158 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 EDEM2Q9BV94 578 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 ACE2Q9BYF1 805 aaPredicted RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 NOL6Q9H6R4 1146 aaKnown RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 SGK2Q9HBY8 427 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 PCDH18Q9HCL0 1135 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 LUC7LQ9NQ29 371 aaKnown RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 UBA2Q9UBT2 640 aaPredicted RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 EVLQ9UI08 416 aaPredicted RBP10.31□□□□□ -0.76
HERC1-212ENST00000561348 PILRBQ9UKJ0 227 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 SCML1Q9UN30 329 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 NEU3Q9UQ49 428 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms