RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TCRBV7S3A2A0A539 114 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 HEPACAM2A8MVW5 462 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 NEDD8-MDP1E9PL57 170 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 OPA1O60313 960 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 CACNG3O60359 315 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 AP2A1O95782 977 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 TTC4O95801 387 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 PEX11BO96011 259 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 PENKP01210 267 aaPredicted RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 TYRP14679 529 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 MZF1P28698 734 aaPredicted RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 GBP2P32456 591 aaPredicted RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 CD68P34810 354 aaPredicted RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 PHBP35232 272 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 HSD17B3P37058 310 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 VIPR2P41587 438 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 NPY2RP49146 381 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 EIF3BP55884 814 aaKnown RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 GAD2Q05329 585 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 SULT2A1Q06520 285 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 IFFO1Q0D2I5 559 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 MPP3Q13368 585 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 PDGFRLQ15198 375 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 BBS9Q3SYG4 887 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 FSCBQ5H9T9 825 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 LY6G5CQ5SRR4 150 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 RNF43Q68DV7 783 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 LRRC8BQ6P9F7 803 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 MTSS1LQ765P7 747 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 OTOP3Q7RTS5 596 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 CCNJLQ8IV13 435 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 PALM2Q8IXS6 379 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 IQCKQ8N0W5 287 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 GOLGA6L1Q8N7Z2 621 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 DCAF4L2Q8NA75 395 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 ATP2A3Q93084 1043 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 PSKH2Q96QS6 385 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 CINPQ9BW66 212 aaPredicted RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 POLR1EQ9GZS1 481 aaKnown RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 TTYH1Q9H313 450 aaPredicted RBP10.48□□□□□ -0.73
USP3-219ENST00000561326 SEMA4AQ9H3S1 761 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 PLK2Q9NYY3 685 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 MARK1Q9P0L2 795 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 WNT6Q9Y6F9 365 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 DENND4AQ7Z401 1863 aa10.48□□□□□ -0.73
USP3-219ENST00000561326 MAGEB16A2A368 324 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 GOLGA6L10A6NI86 522 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 SDR42E2A6NKP2 422 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 E7ESA3 106 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 SPAG6O75602 509 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 TMEM63AO94886 807 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 SUN1O94901 812 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 LAMP2P13473 410 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 TSHRP16473 764 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 CSKP41240 450 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 NSUN2Q08J23 767 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP3-219ENST00000561326 LMAN2Q12907 356 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 COL19A1Q14993 1142 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 DHCR24Q15392 516 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 KYNUQ16719 465 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 CCDC38Q502W7 563 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 HSP90B2PQ58FF3 399 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 FNBP1LQ5T0N5 605 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 SYCP2LQ5T4T6 812 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 LRIG3Q6UXM1 1119 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 MFSD6LQ8IWD5 586 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 ZBED8Q8IZ13 594 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 DNAAF3Q8N9W5 541 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
USP3-219ENST00000561326 OR52K2Q8NGK3 314 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 ALG14Q96F25 216 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 IMP4Q96G21 291 aaKnown RBP10.47□□□□□ -0.73
USP3-219ENST00000561326 SERPINB12Q96P63 405 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 NAT9Q9BTE0 207 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 FSD1LQ9BXM9 530 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 CDC42EP4Q9H3Q1 356 aaKnown RBP10.47□□□□□ -0.73
USP3-219ENST00000561326 PDFQ9HBH1 243 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 DNAJC17Q9NVM6 304 aaKnown RBP10.47□□□□□ -0.73
USP3-219ENST00000561326 BFARQ9NZS9 450 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 CD207Q9UJ71 328 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 PLAAQ9Y263 795 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 OR51B4Q9Y5P0 310 aa10.47□□□□□ -0.73
USP3-219ENST00000561326 A0A087WUV0 522 aaPredicted RBP10.46□□□□□ -0.73
USP3-219ENST00000561326 F5H423 210 aaPredicted RBP10.46□□□□□ -0.73
USP3-219ENST00000561326 HOXC11O43248 304 aaPredicted RBP10.46□□□□□ -0.73
USP3-219ENST00000561326 RIPK2O43353 540 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 TBX10O75333 385 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 PMPCBO75439 489 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 ZMPSTE24O75844 475 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 CPP00450 1065 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 SERPINF2P08697 491 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 GSTA2P09210 222 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 ADH5P11766 374 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 PABPC1P11940 636 aaKnown RBP10.46□□□□□ -0.73
USP3-219ENST00000561326 LTBRP36941 435 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 NNMTP40261 264 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 FAM193AP78312 1265 aa10.46□□□□□ -0.73
USP3-219ENST00000561326 DLX2Q07687 328 aaPredicted RBP10.46□□□□□ -0.73
USP3-219ENST00000561326 CDH17Q12864 832 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms