RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 FAM172AQ8WUF8 416 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 RAB7BQ96AH8 199 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 VCPIP1Q96JH7 1222 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 PSMB7Q99436 277 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
TPM1-223ENST00000560445 EPAS1Q99814 870 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 AGPAT1Q99943 283 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 NCAPGQ9BPX3 1015 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 BPIFA3Q9BQP9 254 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 HEPHQ9BQS7 1158 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 OSBPL1AQ9BXW6 950 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 CATSPERBQ9H7T0 1116 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 TMEM248Q9NWD8 314 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 KLK13Q9UKR3 277 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 PCDHGA1Q9Y5H4 931 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 IGF2RP11717 2491 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 COL5A1P20908 1838 aaPredicted RBP14.38□□□□□ -0.11
TPM1-223ENST00000560445 PLXNA2O75051 1894 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 TP53BP1Q12888 1972 aaPredicted RBP14.37□□□□□ -0.11
TPM1-223ENST00000560445 A0A0D9SEW6 157 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 A0A1W2PR77 199 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 SIGLEC16A6NMB1 481 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 C10orf142B7Z368 130 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 FGF10O15520 208 aaPredicted RBP14.37□□□□□ -0.11
TPM1-223ENST00000560445 PLEKP08567 350 aaPredicted RBP14.37□□□□□ -0.11
TPM1-223ENST00000560445 CHRNB2P17787 502 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 RRM1P23921 792 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 ITGB7P26010 798 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 HNF1BP35680 557 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 RXRGP48443 463 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 KLK7P49862 253 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 DNA2P51530 1060 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 ZNF143P52747 638 aaPredicted RBP14.37□□□□□ -0.11
TPM1-223ENST00000560445 SNRPD1P62314 119 aaKnown RBP14.37□□□□□ -0.11
TPM1-223ENST00000560445 PPP2CBP62714 309 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 RPS21P63220 83 aaKnown RBP14.37□□□□□ -0.11
TPM1-223ENST00000560445 PPP2CAP67775 309 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 TYRO3Q06418 890 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 RAD51Q06609 339 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 CCDC14Q49A88 953 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 C2CD6Q53TS8 623 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 CARD16Q5EG05 197 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 FBXL19Q6PCT2 694 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 HORMAD1Q86X24 394 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 CENPIQ92674 756 aaPredicted RBP14.37□□□□□ -0.11
TPM1-223ENST00000560445 KLHDC7BQ96G42 594 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 CNPY3Q9BT09 278 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 ANLNQ9NQW6 1124 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 TMEM131Q92545 1883 aa14.37□□□□□ -0.11
TPM1-223ENST00000560445 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
TPM1-223ENST00000560445 PCDH8O95206 1070 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 GSRP00390 522 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 MT-CO1P00395 513 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 HNRNPA2B1P22626 353 aaKnown RBP14.36□□□□□ -0.11
TPM1-223ENST00000560445 EPHA8P29322 1005 aaPredicted RBP14.36□□□□□ -0.11
TPM1-223ENST00000560445 L1CAMP32004 1257 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 YBEYP58557 167 aaPredicted RBP14.36□□□□□ -0.11
TPM1-223ENST00000560445 ILKQ13418 452 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 PIP5KL1Q5T9C9 394 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 MANEALQ5VSG8 457 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 LAYNQ6UX15 382 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 LINGO4Q6UY18 593 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 MON1BQ7L1V2 547 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 TMPRSS7Q7RTY8 843 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 ZNF354CQ86Y25 554 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 AOPEPQ8N6M6 819 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 OR7D4Q8NG98 312 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 GRIN3AQ8TCU5 1115 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 TRIM11Q96F44 468 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 FEM1CQ96JP0 617 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 C1QTNF7Q9BXJ2 289 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 TMEM121BQ9BXQ6 578 aaPredicted RBP14.36□□□□□ -0.11
TPM1-223ENST00000560445 PARVAQ9NVD7 372 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 SARDHQ9UL12 918 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 ZMIZ1Q9ULJ6 1067 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 SNX10Q9Y5X0 201 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 SLCO1B1Q9Y6L6 691 aa14.36□□□□□ -0.11
TPM1-223ENST00000560445 A0A1W2PQU0 124 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 I6L893 689 aaPredicted RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 EPHB6O15197 1021 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 AP1G1O43747 822 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 DKK1O94907 266 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 LDOC1O95751 146 aaPredicted RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 ALPPL2P10696 532 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 TNFAIP3P21580 790 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 MAT2AP31153 395 aaKnown RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 RFC1P35251 1148 aaPredicted RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 NUMBP49757 651 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 CCNHP51946 323 aaPredicted RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 ZNF135P52742 658 aaPredicted RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 HDAC4P56524 1084 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 C15orf59Q2T9L4 293 aaPredicted RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 POM121L1PQ3SYA9 428 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 PARP15Q460N3 678 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 ACAD10Q6JQN1 1059 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 TRNP1Q6NT89 227 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 CCNI2Q6ZMN8 369 aaPredicted RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 DPY19L3Q6ZPD9 716 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 TMPRSS12Q86WS5 348 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 RYBPQ8N488 228 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms