RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CAPN6Q9Y6Q1 641 aa20.67■□□□□ 0.9
TSPAN3-207ENST00000559494 PROB1E7EW31 1015 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 KRT86O43790 486 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 ZRANB2O95218 330 aaKnown RBP eCLIP20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 BCKDHBP21953 392 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 CTNNA2P26232 953 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 CTNNA1P35221 906 aaKnown RBP20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 SERPINB6P35237 376 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 CDKN2BP42772 138 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 PEX5P50542 639 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 DNA2P51530 1060 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 SLC10A2Q12908 348 aaPredicted RBP20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 ELAVL3Q14576 367 aaKnown RBP20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 ZNF776Q68DI1 518 aaPredicted RBP20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 RCOR2Q8IZ40 523 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 CHST14Q8NCH0 376 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 UBA2Q9UBT2 640 aaPredicted RBP20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 MBD1Q9UIS9 605 aaPredicted RBP20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 PPP2R2CQ9Y2T4 447 aa20.66■□□□□ 0.9
TSPAN3-207ENST00000559494 IGHV1OR15-9A0A0B4J2B8 117 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 MFSD11O43934 449 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 RNASEH1O60930 286 aaKnown RBP20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 ZNF217O75362 1048 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 TMCC1O94876 653 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 ACADMP11310 421 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 TPMTP51580 245 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 GBE1Q04446 702 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 ZBTB16Q05516 673 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 IL10RBQ08334 325 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 BYSLQ13895 437 aaKnown RBP20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 SIM2Q14190 667 aaPredicted RBP20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 CST6Q15828 149 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 ODF2Q5BJF6 829 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 CARD16Q5EG05 197 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 SLC9A4Q6AI14 798 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 SPOCD1Q6ZMY3 1216 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 DPY19L3Q6ZPD9 716 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 CEP68Q76N32 757 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 PLPP6Q8IY26 295 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 PLD5Q8N7P1 536 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 SUMF1Q8NBK3 374 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 CASKIN2Q8WXE0 1202 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 OR8D1Q8WZ84 308 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 MAK16Q9BXY0 300 aaKnown RBP20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 TM6SF2Q9BZW4 377 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 EPC1Q9H2F5 836 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 SEMA4AQ9H3S1 761 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 LZTFL1Q9NQ48 299 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 AMFRQ9UKV5 643 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 SARDHQ9UL12 918 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 PPM1HQ9ULR3 514 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 CYP8B1Q9UNU6 501 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 WDR87Q6ZQQ6 2873 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 ZFHX2Q9C0A1 2572 aaPredicted RBP20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 MYO15AQ9UKN7 3530 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 RIF1Q5UIP0 2472 aaKnown RBP20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 DMDP11532 3685 aa20.65■□□□□ 0.9
TSPAN3-207ENST00000559494 PLXND1Q9Y4D7 1925 aa20.64■□□□□ 0.9
TSPAN3-207ENST00000559494 THADAQ6YHU6 1953 aa20.64■□□□□ 0.9
TSPAN3-207ENST00000559494 RNF103O00237 685 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 MID1O15344 667 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 MAFKO60675 156 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 FTCDO95954 541 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 DNTTP04053 509 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 CTSLP07711 333 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 CHRNA3P32297 505 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 SLC8A1P32418 973 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 LLGL1Q15334 1064 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 PEX26Q7Z412 305 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 KBTBD6Q86V97 674 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 RFX6Q8HWS3 928 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 SYCE1Q8N0S2 351 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 EXD1Q8NHP7 514 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 PABPC3Q9H361 631 aaKnown RBP20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 SHROOM3Q8TF72 1996 aa20.64■□□□□ 0.89
TSPAN3-207ENST00000559494 CCDC66A2RUB6 948 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 ALOX15BO15296 676 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 MAP3K6O95382 1288 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 PEX11BO96011 259 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 IL1BP01584 269 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 IGLV3-19P01714 112 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 KRT10P13645 584 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 PSMD8P48556 350 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 METAP1P53582 386 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 GALNT2Q10471 571 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 PLK5Q496M5 336 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 PRR23BQ6ZRT6 265 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 LRRC49Q8IUZ0 686 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 PIP4K2CQ8TBX8 421 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 ALG3Q92685 438 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 VOPP1Q96AW1 172 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 ZC3H10Q96K80 434 aaKnown RBP20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 CCDC114Q96M63 670 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 DUSP15Q9H1R2 295 aaPredicted RBP20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 SP110Q9HB58 689 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 WSB2Q9NYS7 404 aaPredicted RBP20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 DTLQ9NZJ0 730 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 LHX3Q9UBR4 397 aa20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 PACSIN2Q9UNF0 486 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms