RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SDF4Q9BRK5 362 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 GATA5Q9BWX5 397 aaPredicted RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 LMAN2LQ9H0V9 348 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 EIF2B3Q9NR50 452 aaKnown RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
CASC4-206ENST00000558847 UPB1Q9UBR1 384 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 SERGEFQ9UGK8 458 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 NAALADL1Q9UQQ1 740 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 LYVE1Q9Y5Y7 322 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 ARHGAP10A1A4S6 786 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 PRSS47A8MTI9 375 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 SMIM22K7EJ46 135 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 CEP104O60308 925 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 NFATC1O95644 943 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 PLAUP00749 431 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 SERPINC1P01008 464 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 CYP2A6P11509 494 aaPredicted RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 CDH2P19022 906 aaPredicted RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 GABRB2P47870 512 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 HARS2P49590 506 aaKnown RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 RPS3AP61247 264 aaKnown RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 TDGQ13569 410 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 CCNG2Q16589 344 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 GPATCH4Q5T3I0 446 aaKnown RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 PRAMEF17Q5VTA0 474 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 FCRLBQ6BAA4 426 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 CCDC129Q6ZRS4 1044 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 CYB5R4Q7L1T6 521 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 SETD9Q8NE22 299 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 DNAAF1Q8NEP3 725 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 SMARCE1Q969G3 411 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 FAM149B1Q96BN6 582 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 BARD1Q99728 777 aaKnown RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 CLSTN3Q9BQT9 956 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 MUC13Q9H3R2 512 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 PRKRIP1Q9H875 184 aaPredicted RBP4.73□□□□□ -1.65
CASC4-206ENST00000558847 Q9N2J8 555 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 GRHL1Q9NZI5 618 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 PEMTQ9UBM1 199 aa4.73□□□□□ -1.65
CASC4-206ENST00000558847 DPPA5A6NC42 116 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 WIPF3A6NGB9 483 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 RRHO14718 337 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 TSPAN9O75954 239 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 IL1AP01583 271 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 SPARCP09486 303 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 FCGR2AP12318 317 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 ZNF8P17098 575 aaPredicted RBP4.72□□□□□ -1.65
CASC4-206ENST00000558847 YWHAQP27348 245 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 POU1F1P28069 291 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 FMO4P31512 558 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 CPOXP36551 454 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 TUBA4AP68366 448 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 MEA1Q16626 185 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 GSTA3Q16772 222 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 EDRF1Q3B7T1 1238 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 ARL13AQ5H913 290 aaPredicted RBP4.72□□□□□ -1.65
CASC4-206ENST00000558847 SNX30Q5VWJ9 437 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 ISM2Q6H9L7 571 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 NCAPH2Q6IBW4 605 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 C17orf99Q6UX52 265 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 GSTA5Q7RTV2 222 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 PRSS45Q7RTY3 260 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 RNF144BQ7Z419 303 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 TFAP2DQ7Z6R9 452 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 PXKQ7Z7A4 578 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 UBE2Q1Q7Z7E8 422 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 TADA2BQ86TJ2 420 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 CHSY1Q86X52 802 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 FAM185AQ8N0U4 392 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 OSR1Q8TAX0 266 aaPredicted RBP4.72□□□□□ -1.65
CASC4-206ENST00000558847 HDAC7Q8WUI4 952 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 POMGNT1Q8WZA1 660 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 MPHOSPH8Q99549 860 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 EHD2Q9NZN4 543 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 LIMA1Q9UHB6 759 aaKnown RBP4.72□□□□□ -1.65
CASC4-206ENST00000558847 CDH22Q9UJ99 828 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 GPR34Q9UPC5 381 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 SLC45A1Q9Y2W3 748 aa4.72□□□□□ -1.65
CASC4-206ENST00000558847 DYTNA2CJ06 578 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 NPIPB15A6NHN6 443 aaPredicted RBP4.71□□□□□ -1.66
CASC4-206ENST00000558847 FIBPO43427 364 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 RBMXL2O75526 392 aaKnown RBP4.71□□□□□ -1.66
CASC4-206ENST00000558847 GFPT2O94808 682 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 CBX6O95503 412 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 ST6GAL1P15907 406 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 NFKBIAP25963 317 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 PTGER1P34995 402 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 MLH1P40692 756 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 CPA2P48052 419 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 DCTN2Q13561 401 aaKnown RBP4.71□□□□□ -1.66
CASC4-206ENST00000558847 CUL4AQ13619 759 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 RPE65Q16518 533 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 PROSER3Q2NL68 480 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 ATG9BQ674R7 924 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 NAPEPLDQ6IQ20 393 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 CDC73Q6P1J9 531 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 TMEM154Q6P9G4 183 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 PTF1AQ7RTS3 328 aa4.71□□□□□ -1.66
CASC4-206ENST00000558847 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms