RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 GRK6P43250 576 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 ZNF165P49910 485 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 GSCP56915 257 aaPredicted RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 TAS2R38P59533 333 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 RPL7AP62424 266 aaKnown RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 FILIP1LQ4L180 1135 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 SLC45A4Q5BKX6 768 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 EFHC2Q5JST6 749 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 PIP5KL1Q5T9C9 394 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 DCUN1D2Q6PH85 259 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 ZNF783Q6ZMS7 281 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 DPY19L3Q6ZPD9 716 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 SLCO6A1Q86UG4 719 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 NLRP14Q86W24 1093 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 ZNF354CQ86Y25 554 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 DNAAF5Q86Y56 855 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 RYBPQ8N488 228 aaPredicted RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 OR6K2Q8NGY2 324 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 BAP1Q92560 729 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 CENPIQ92674 756 aaPredicted RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 FAM131CQ96AQ9 280 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 ELF4Q99607 663 aaPredicted RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 OSBPL2Q9H1P3 480 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 GDF3Q9NR23 364 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 TAS2R14Q9NYV8 317 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 NEU3Q9UQ49 428 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 APOBEC2Q9Y235 224 aaKnown RBP12.17□□□□□ -0.46
HERC1-202ENST00000558324 NEUROG3Q9Y4Z2 214 aa12.17□□□□□ -0.46
HERC1-202ENST00000558324 CACNA1EQ15878 2313 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 ACACBO00763 2458 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 A0A1B0GTQ1 180 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 A0A1W2PQU0 124 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 TCRBV5S1A1TA0A578 114 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 C10orf142B7Z368 130 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 TLR4O00206 839 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 SLC31A1O15431 190 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 CREB3O43889 395 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 RAMP2O60895 175 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 ZNF821O75541 412 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 LEFTY1O75610 366 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 ETFBP38117 255 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 CCNHP51946 323 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 ZNF143P52747 638 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 NRG1Q02297 640 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 ASIC2Q16515 512 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 SETMARQ53H47 684 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 ACAD10Q6JQN1 1059 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 IRF2BP2Q7Z5L9 587 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 SLFN11Q7Z7L1 901 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 GLRX5Q86SX6 157 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 TRIM69Q86WT6 500 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 MCOLN2Q8IZK6 566 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 PCDH20Q8N6Y1 951 aaKnown RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 TMIEQ8NEW7 156 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 BAHD1Q8TBE0 780 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 GATA6Q92908 595 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 NTAN1Q96AB6 310 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 CDC6Q99741 560 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 ZDHHC6Q9H6R6 413 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 PREBQ9HCU5 417 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 FZD3Q9NPG1 666 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 ARHGAP20Q9P2F6 1191 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 TPX2Q9ULW0 747 aaKnown RBP12.16□□□□□ -0.46
HERC1-202ENST00000558324 WASF2Q9Y6W5 498 aa12.16□□□□□ -0.46
HERC1-202ENST00000558324 SYCE3A1L190 88 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 PCDHGA12O60330 932 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 PCDH8O95206 1070 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 SERPINC1P01008 464 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 ITGAVP06756 1048 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 EPHB2P29323 1055 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 GKP32189 559 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 NXPH1P58417 271 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 OGDHQ02218 1023 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 STAT4Q14765 748 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 POLD3Q15054 466 aaPredicted RBP12.15□□□□□ -0.46
HERC1-202ENST00000558324 SHBQ15464 509 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 INAVAQ3KP66 663 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 CARD16Q5EG05 197 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 PPP1R15BQ5SWA1 713 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 E4F1Q66K89 784 aaPredicted RBP12.15□□□□□ -0.46
HERC1-202ENST00000558324 SEL1L3Q68CR1 1132 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 DBX2Q6ZNG2 339 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 ERN2Q76MJ5 926 aaKnown RBP12.15□□□□□ -0.46
HERC1-202ENST00000558324 SPATS2Q86XZ4 545 aaKnown RBP12.15□□□□□ -0.46
HERC1-202ENST00000558324 NETO2Q8NC67 525 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 ADAMTS14Q8WXS8 1223 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 ARHGEF2Q92974 986 aaKnown RBP12.15□□□□□ -0.46
HERC1-202ENST00000558324 PPP1R16AQ96I34 528 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 NAP1L5Q96NT1 182 aaPredicted RBP12.15□□□□□ -0.46
HERC1-202ENST00000558324 HEPHQ9BQS7 1158 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 CNPY3Q9BT09 278 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 SYT11Q9BT88 431 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 CEP44Q9C0F1 390 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 GPATCH2LQ9NWQ4 482 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms