RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KCNE5Q9UJ90 142 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 TUBE1Q9UJT0 475 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 OSGIN1Q9UJX0 560 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 PADI1Q9ULC6 663 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 VPS4AQ9UN37 437 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 FPGT-TNNI3KV9GXZ4 949 aa3.97□□□□□ -1.77
TDP1-217ENST00000557782 ARHGAP10A1A4S6 786 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 A1L4Q6 167 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 USP17L23D6RBM5 183 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SNAP23O00161 211 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SLC16A3O15427 465 aaKnown RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 PRICKLE3O43900 615 aaPredicted RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 DIAPH2O60879 1101 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 KERAO60938 352 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 AVILO75366 819 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 PMPCBO75439 489 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SLC25A12O75746 678 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SEC31AO94979 1220 aaKnown RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 KAT7O95251 611 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SNRNP70P08621 437 aaKnown RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 CR2P20023 1033 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 DUSP1P28562 367 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 HOXC8P31273 242 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 GKP32189 559 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SLC8A1P32418 973 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 MCM5P33992 734 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 BMPR1AP36894 532 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 NPY4RP50391 375 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 BLKP51451 505 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 POLGP54098 1239 aaPredicted RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 PNLIPRP2P54317 469 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SLC12A2P55011 1212 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 MRPS5P82675 430 aaKnown RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 B4GALNT1Q00973 533 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SP2Q02086 613 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 OCA2Q04671 838 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 IKQ13123 557 aaPredicted RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 GRM7Q14831 915 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SETMARQ53H47 684 aaPredicted RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 FBLN7Q53RD9 439 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 PRSS36Q5K4E3 855 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SPDYAQ5MJ70 313 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 MPP7Q5T2T1 576 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SERTAD4-AS1Q5TG53 156 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 METRNLQ641Q3 311 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 AADACL2Q6P093 401 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 IL20RBQ6UXL0 311 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SERPINA13PQ6UXR4 307 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 MSANTD1Q6ZTZ1 278 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 NUP54Q7Z3B4 507 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 FAM160B2Q86V87 743 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 MAPKAPK5Q8IW41 473 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 TUSC5Q8IXB3 177 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 FAM185AQ8N0U4 392 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 DPP10Q8N608 796 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 AMER2Q8N7J2 671 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 PNPLA1Q8N8W4 532 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 ADAMTS17Q8TE56 1095 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 NSMCE1Q8WV22 266 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 ZFPM2Q8WW38 1151 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SGCDQ92629 289 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 TAF4BQ92750 862 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 KRT35Q92764 455 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 ZKSCAN4Q969J2 545 aaPredicted RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 ZNF622Q969S3 477 aaKnown RBP eCLIP3.96□□□□□ -1.78
TDP1-217ENST00000557782 MOAP1Q96BY2 351 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 MBD6Q96DN6 1003 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 TMEM176AQ96HP8 235 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 HS6ST2Q96MM7 605 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 PAFAH2Q99487 392 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SRSF8Q9BRL6 282 aaKnown RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 SLC25A23Q9BV35 468 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SGPP1Q9BX95 441 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.96□□□□□ -1.78
TDP1-217ENST00000557782 HRH4Q9H3N8 390 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 NSUN3Q9H649 340 aaKnown RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 ASAH2Q9NR71 780 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SNTG1Q9NSN8 517 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 TRMT1Q9NXH9 659 aaKnown RBP3.96□□□□□ -1.78
TDP1-217ENST00000557782 ARHGEF38Q9NXL2 777 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 LRIT1Q9P2V4 623 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 CACNG4Q9UBN1 327 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 IRAK3Q9Y616 596 aa3.96□□□□□ -1.78
TDP1-217ENST00000557782 SH3D21A4FU49 640 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 OR6C68A6NDL8 312 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 LRRC72A6NJI9 287 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 TTC34A8MYJ7 566 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 BIN1O00499 593 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SPRY2O43597 315 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 ZBTB14O43829 449 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 B4GALT4O60513 344 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 MITFO75030 526 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 PPFIA2O75334 1257 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 TPPPO94811 219 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 PNPP00491 289 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 SLC4A1P02730 911 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 TPOP07202 933 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 HOXB5P09067 269 aa3.95□□□□□ -1.78
TDP1-217ENST00000557782 HOXB9P17482 250 aaPredicted RBP3.95□□□□□ -1.78
TDP1-217ENST00000557782 PON1P27169 355 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms