RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 TMEM110Q86TL2 294 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 WDR36Q8NI36 951 aaKnown RBP18.77■□□□□ 0.6
ABCD4-228ENST00000557588 LMO3Q8TAP4 145 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 SNX21Q969T3 373 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 MED15Q96RN5 788 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 METTL14Q9HCE5 456 aaKnown RBP18.77■□□□□ 0.6
ABCD4-228ENST00000557588 DDIT4Q9NX09 232 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 ATXN7L1Q9ULK2 861 aaPredicted RBP18.77■□□□□ 0.6
ABCD4-228ENST00000557588 VANGL2Q9ULK5 521 aa18.77■□□□□ 0.6
ABCD4-228ENST00000557588 RP1P56715 2156 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 POM121BA6NF01 834 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 TPP1O14773 563 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 AQP9O43315 295 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 CLDN11O75508 207 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 MT-CO1P00395 513 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 RABIFP47224 123 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 CLCN6P51797 869 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 LRRC63Q05C16 580 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 SRSF1Q07955 248 aaKnown RBP eCLIP18.76■□□□□ 0.59
ABCD4-228ENST00000557588 NFATC3Q12968 1075 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 FGL2Q14314 439 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 NR0B2Q15466 257 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 C5orf22Q49AR2 442 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 ANKRD40Q6AI12 368 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 KIAA1161Q6NSJ0 714 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 ATP11CQ8NB49 1132 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 WDR48Q8TAF3 677 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 PPP1R16AQ96I34 528 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 SLC2A13Q96QE2 648 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 CCNL2Q96S94 520 aaPredicted RBP18.76■□□□□ 0.59
ABCD4-228ENST00000557588 PSMB7Q99436 277 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 C2orf49Q9BVC5 232 aaPredicted RBP18.76■□□□□ 0.59
ABCD4-228ENST00000557588 FAM117AQ9C073 453 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 GOLPH3LQ9H4A5 285 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 IL17BQ9UHF5 180 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 VPS51Q9UID3 782 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 KLF15Q9UIH9 416 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 CNTN6Q9UQ52 1028 aa18.76■□□□□ 0.59
ABCD4-228ENST00000557588 HEMK1Q9Y5R4 338 aaPredicted RBP18.76■□□□□ 0.59
ABCD4-228ENST00000557588 CCDC187A0A096LP49 1063 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 A0A1W2PQ27 194 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 A0A1W2PQ64 194 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 TERTO14746 1132 aaKnown RBP18.75■□□□□ 0.59
ABCD4-228ENST00000557588 TNFSF15O95150 251 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 RPS21P63220 83 aaKnown RBP18.75■□□□□ 0.59
ABCD4-228ENST00000557588 KRT83P78385 493 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 CDK17Q00537 523 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 TAF5Q15542 800 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 ZSCAN23Q3MJ62 389 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 PERM1Q5SV97 790 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 RRAGAQ7L523 313 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 ZSCAN30Q86W11 494 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 ARHGEF19Q8IW93 802 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 EXD3Q8N9H8 876 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 CHST14Q8NCH0 376 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 GRIN3AQ8TCU5 1115 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 NAT6Q93015 286 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 BOCQ9BWV1 1114 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 SRRTQ9BXP5 876 aaKnown RBP18.75■□□□□ 0.59
ABCD4-228ENST00000557588 MUC3BQ9H195 1237 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 RMND1Q9NWS8 449 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 HS3ST4Q9Y661 456 aa18.75■□□□□ 0.59
ABCD4-228ENST00000557588 TRIM49BA6NDI0 452 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 K7ERQ8 282 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 RAD51BO15315 384 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 P4HA2O15460 535 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 SMAD6O43541 496 aaKnown RBP18.74■□□□□ 0.59
ABCD4-228ENST00000557588 SNAP91O60641 907 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 CENPBP07199 599 aaPredicted RBP18.74■□□□□ 0.59
ABCD4-228ENST00000557588 GLI1P08151 1106 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 NEK3P51956 506 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 CDH4P55283 916 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 PDCLQ13371 301 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 DEFB133Q30KQ1 61 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
ABCD4-228ENST00000557588 C22orf39Q6P5X5 142 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 CRTC1Q6UUV9 634 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 XKR5Q6UX68 686 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 DCAF4L2Q8NA75 395 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 KREMEN1Q96MU8 473 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 SLC17A9Q9BYT1 436 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 TRIM4Q9C037 500 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 ASNSD1Q9NWL6 643 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 IL36AQ9UHA7 158 aa18.74■□□□□ 0.59
ABCD4-228ENST00000557588 SYNJ2BP-COX16A0A087WUM0 186 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 ZNF202O95125 648 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 ADRB3P13945 408 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 JUNDP17535 347 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 RRM1P23921 792 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 GGCXP38435 758 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 KRT85P78386 507 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 CETN1Q12798 172 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
ABCD4-228ENST00000557588 PDE1CQ14123 709 aaPredicted RBP18.73■□□□□ 0.59
ABCD4-228ENST00000557588 DRAP1Q14919 205 aaPredicted RBP18.73■□□□□ 0.59
ABCD4-228ENST00000557588 ARSIQ5FYB1 569 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 TPRG1LQ5T0D9 272 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 FOXR1Q6PIV2 292 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 DEFB106AQ8N104 65 aa18.73■□□□□ 0.59
ABCD4-228ENST00000557588 LMX1AQ8TE12 382 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms