RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 BCAR1P56945 870 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DAOAP59103 153 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 EIF3EP60228 445 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DEUP1Q05D60 604 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ADCY2Q08462 1091 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ADCY1Q08828 1119 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 IFFO1Q0D2I5 559 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ELAVL2Q12926 359 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DPYSL3Q14195 570 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 TRIP13Q15645 432 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 FXNQ16595 210 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 NFE2Q16621 373 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DUSP6Q16828 381 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ARL13BQ3SXY8 428 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DCAF6Q58WW2 860 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ANKRD20A8PQ5CZ79 823 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 RAB41Q5JT25 222 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 IZUMO3Q5VZ72 239 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 FBXW10Q5XX13 1052 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DENND2CQ68D51 928 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ANKRD54Q6NXT1 300 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DARS2Q6PI48 645 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 BNC2Q6ZN30 1099 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 TRMT10CQ7L0Y3 403 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 BZW1Q7L1Q6 419 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ANKS1BQ7Z6G8 1248 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 KIAA0907Q7Z7F0 614 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ZNF280BQ86YH2 543 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 SCML4Q8N228 414 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 FBXO27Q8NI29 283 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 HASPINQ8TF76 798 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 CLEC4CQ8WTT0 213 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 LINC01599Q8WXQ3 324 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 HAUS1Q96CS2 278 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 SLC2A13Q96QE2 648 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 NPY6RQ99463 290 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 SH3GL2Q99962 352 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 FAM118BQ9BPY3 351 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ZNF670Q9BS34 389 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 TMEM175Q9BSA9 504 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 SNRNP25Q9BV90 132 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 FAM126AQ9BYI3 521 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 TXLNGYQ9BZA5 131 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ULBP1Q9BZM6 244 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 PABPC3Q9H361 631 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 DHX35Q9H5Z1 703 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 PCDH9Q9HC56 1237 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 PCDH18Q9HCL0 1135 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 PNPLA8Q9NP80 782 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 RCOR3Q9P2K3 495 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 WNT16Q9UBV4 365 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 GPN3Q9UHW5 284 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 TPX2Q9ULW0 747 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 AP4E1Q9UPM8 1137 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 NEU2Q9Y3R4 380 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 RWDD3Q9Y3V2 267 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ACACAQ13085 2346 aa7.02□□□□□ -1.29
SLIRP-204ENST00000555890 UTP20O75691 2785 aaKnown RBP7.02□□□□□ -1.29
SLIRP-204ENST00000555890 ATRQ13535 2644 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 FNDC1Q4ZHG4 1894 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 A0A087WV48 116 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 FAM221AA4D161 298 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 GOLGA6CA6NDK9 693 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 OR6C75A6NL08 312 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 METTL12A8MUP2 240 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 HMGB1P1B2RPK0 211 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 H3BRJ5 948 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 H7C0C1 242 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 H7C4K7 107 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 M0QYT0 321 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 DNALI1O14645 258 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 KHNYNO15037 678 aaKnown RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ZNF189O75820 626 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 IFNB1P01574 187 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 LTFP02788 710 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 MYZAPP0CAP1 466 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 GOLGA6DP0CG33 693 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 RBP3P10745 1247 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 NCAM1P13591 858 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 BDNFP23560 247 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 IVDP26440 423 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 KLRC2P26717 231 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 L1CAMP32004 1257 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ACTN2P35609 894 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 GRIK1P39086 918 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ABCG1P45844 678 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ATP5OP48047 213 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 NR2C2P49116 596 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 VPS41P49754 854 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 NRLP54845 237 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ERVFC1P60507 584 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ROR1Q01973 937 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 TNP2Q05952 138 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 GPS1Q13098 491 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 OASLQ15646 514 aaKnown RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 DPYSL2Q16555 572 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 P3H1Q32P28 736 aa7.01□□□□□ -1.29
SLIRP-204ENST00000555890 ZC3H12AQ5D1E8 599 aaKnown RBP7.01□□□□□ -1.29
SLIRP-204ENST00000555890 PPP6R3Q5H9R7 873 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms