RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 WT1P19544 449 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 GCLMP48507 274 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 ATP1A2P50993 1020 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 CEBPZQ03701 1054 aaKnown RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 ENPEPQ07075 957 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 CUL4AQ13619 759 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 CUL4BQ13620 913 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 STAT4Q14765 748 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 GOLGA7BQ2TAP0 167 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 SETMARQ53H47 684 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 DCAF6Q58WW2 860 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 PERM1Q5SV97 790 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 LYPD4Q6UWN0 246 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 UBR7Q8N806 425 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 LINC00301Q8NCQ3 95 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 ZNF548Q8NEK5 533 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 MAPK15Q8TD08 544 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 KCTD13Q8WZ19 329 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 EXTL1Q92935 676 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 DHX58Q96C10 678 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 ALG14Q96F25 216 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 KLHDC7BQ96G42 594 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 RPL10LQ96L21 214 aaKnown RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 HEXIM2Q96MH2 286 aaKnown RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 BLZF1Q9H2G9 400 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 MAGEF1Q9HAY2 307 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 PREBQ9HCU5 417 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 IGSF5Q9NSI5 407 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 STIM2Q9P246 746 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 XPO7Q9UIA9 1087 aaKnown RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 PCDHGA7Q9Y5G6 932 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 HEMK1Q9Y5R4 338 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 VPS37CA5D8V6 355 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 O00370 1275 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 NTN3O00634 580 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 PDXKO00764 312 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 TCEA3O75764 348 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 CTSLP07711 333 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 TRIM21P19474 475 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 FBN2P35556 2912 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 SLC11A2P49281 568 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 VAMP7P51809 220 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 PLK1P53350 603 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 AMPD3Q01432 767 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 TLE1Q04724 770 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 SRSF11Q05519 484 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 ZNF177Q13360 481 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 EIF4EBP2Q13542 120 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 CDH18Q13634 790 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 FGL2Q14314 439 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 FZD2Q14332 565 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 POM121L1PQ3SYA9 428 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 TPRG1LQ5T0D9 272 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 CXorf57Q6NSI4 855 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 ZCCHC8Q6NZY4 707 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 RBM44Q6ZP01 1051 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 UNC45BQ8IWX7 931 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 CFAP52Q8N1V2 620 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 RNF139Q8WU17 664 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 HTR3CQ8WXA8 447 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 ARRDC3Q96B67 414 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 SGF29Q96ES7 293 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 LIN37Q96GY3 246 aaPredicted RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 ZSWIM1Q9BR11 485 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 FUCA2Q9BTY2 467 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 BOCQ9BWV1 1114 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 TRPM6Q9BX84 2022 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 OSBPL2Q9H1P3 480 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 FZD3Q9NPG1 666 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 CNGB3Q9NQW8 809 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 TSPAN16Q9UKR8 245 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 ZFR2Q9UPR6 939 aaKnown RBP9.35□□□□□ -0.91
PRKCH-218ENST00000555628 TRAF3IP3Q9Y228 551 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 OR51B4Q9Y5P0 310 aa9.35□□□□□ -0.91
PRKCH-218ENST00000555628 A0A1W2PQU0 124 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 ALOX15BO15296 676 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CLSTN1O94985 981 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 TNFSF15O95150 251 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CSF2P04141 144 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 ALPPL2P10696 532 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CLDN2P57739 230 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CLCA4Q14CN2 919 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 TGIF1Q15583 401 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 NFIL3Q16649 462 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CDKN3Q16667 212 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 ZSCAN23Q3MJ62 389 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 NEK5Q6P3R8 708 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 EFL1Q7Z2Z2 1120 aaKnown RBP9.34□□□□□ -0.91
PRKCH-218ENST00000555628 B3GNT8Q7Z7M8 397 aa9.34□□□□□ -0.91
PRKCH-218ENST00000555628 CARNMT1Q8N4J0 409 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms