RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, human

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB3-208	ENST00000555576	BNIPL	Q7Z465	357 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	SETD3	Q86TU7	594 aa	Predicted RBP	13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	SLC47A2	Q86VL8	602 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	SPACA3	Q8IXA5	215 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	ATP11C	Q8NB49	1132 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	BAP1	Q92560	729 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	VOPP1	Q96AW1	172 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	HIC2	Q96JB3	615 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	MUC3B	Q9H195	1237 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	PLCB1	Q9NQ66	1216 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	TMPRSS4	Q9NRS4	437 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	RWDD2A	Q9UIY3	292 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	WASF2	Q9Y6W5	498 aa		13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	TDRD6	O60522	2096 aa	Known RBP	13.57	□□□□□ -0.24
TUBB3-208	ENST00000555576	CHD5	Q8TDI0	1954 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	TRPM6	Q9BX84	2022 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	EIF4E1B	A6NMX2	242 aa	Known RBP	13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	KPNA3	O00505	521 aa	Predicted RBP	13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	FFAR2	O15552	330 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	ZMPSTE24	O75844	475 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	CDH5	P33151	784 aa	Predicted RBP	13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	CLCN1	P35523	988 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	KRT83	P78385	493 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	E2F1	Q01094	437 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	EXOC3L4	Q17RC7	722 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	KDM7A	Q6ZMT4	941 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	DPY19L3	Q6ZPD9	716 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	ERN2	Q76MJ5	926 aa	Known RBP	13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	ZDHHC17	Q8IUH5	632 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	LSM14A	Q8ND56	463 aa	Known RBP	13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	GRIN3A	Q8TCU5	1115 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	IFT43	Q96FT9	208 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	BMF	Q96LC9	184 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	SIK2	Q9H0K1	926 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	TNKS2	Q9H2K2	1166 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	WDCP	Q9H6R7	721 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	RRN3	Q9NYV6	651 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	NLGN3	Q9NZ94	848 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	MPP6	Q9NZW5	540 aa		13.56	□□□□□ -0.24
TUBB3-208	ENST00000555576	FOXN3	O00409	490 aa	Predicted RBP	13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	OPA1	O60313	960 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	LEFTY1	O75610	366 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	DXO	O77932	396 aa	Known RBP	13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	FGFR1OP	O95684	399 aa	Known RBP	13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	PRNP	P04156	253 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	GP1BA	P07359	652 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	MYF5	P13349	255 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	AKT2	P31751	481 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	ACTN2	P35609	894 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	SCNN1A	P37088	669 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	GABRB2	P47870	512 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	ARF5	P84085	180 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	PTK2	Q05397	1052 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	ARSI	Q5FYB1	569 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	KYAT3	Q6YP21	454 aa	Known RBP	13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	TFAP2D	Q7Z6R9	452 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	FAM71A	Q8IYT1	594 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	FAM181A	Q8N9Y4	354 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	OR7D4	Q8NG98	312 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	APOLD1	Q96LR9	279 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	C1orf74	Q96LT6	269 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	CCDC114	Q96M63	670 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	TBCB	Q99426	244 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	CALN1	Q9BXU9	219 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	IL36A	Q9UHA7	158 aa		13.55	□□□□□ -0.24
TUBB3-208	ENST00000555576	TEX51	A0A1B0GUA7	166 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576		A0A1W2PNU3	283 aa	Predicted RBP	13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	POM121B	A6NF01	834 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576		A6NNZ2	444 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576		K7ESM1	405 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	SCAMP1	O15126	338 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	RAD51B	O15315	384 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	CD160	O95971	181 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	ADRB3	P13945	408 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	NME1	P15531	152 aa	Known RBP	13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	ITGB7	P26010	798 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	FLT3	P36888	993 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	SULT1E1	P49888	294 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	SERPINH1	P50454	418 aa	Known RBP	13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	DAB2	P98082	770 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	C19orf57	Q0VDD7	668 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	CCDC173	Q0VFZ6	552 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	FZD2	Q14332	565 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	SLC25A52	Q3SY17	297 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	TPRG1L	Q5T0D9	272 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576		Q6ZSR6	202 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	GPR155	Q7Z3F1	870 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	TMC6	Q7Z403	805 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	ZNF843	Q8N446	348 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	KLF6	Q99612	283 aa	Predicted RBP	13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	CEP44	Q9C0F1	390 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	ASCL3	Q9NQ33	180 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	KLF15	Q9UIH9	416 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	DNAJC12	Q9UKB3	198 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	STAP1	Q9ULZ2	295 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	NEU3	Q9UQ49	428 aa		13.54	□□□□□ -0.24
TUBB3-208	ENST00000555576	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms