RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PLEKHA7Q6IQ23 1121 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 TBC1D3Q8IZP1 549 aaPredicted RBP12.09□□□□□ -0.47
VRK1-204ENST00000555351 OXR1Q8N573 874 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 CCDC185Q8N715 623 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 MFSD2AQ8NA29 543 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 OR7D4Q8NG98 312 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 BAHD1Q8TBE0 780 aaPredicted RBP12.09□□□□□ -0.47
VRK1-204ENST00000555351 FNIP1Q8TF40 1166 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 CASKIN2Q8WXE0 1202 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 SPON2Q9BUD6 331 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 TTYH3Q9C0H2 523 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 EBF2Q9HAK2 575 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 HPCAL4Q9UM19 191 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 APOBEC2Q9Y235 224 aaKnown RBP12.09□□□□□ -0.47
VRK1-204ENST00000555351 FNDC3AQ9Y2H6 1198 aaKnown RBP12.09□□□□□ -0.47
VRK1-204ENST00000555351 NEUROG3Q9Y4Z2 214 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 SLCO1B1Q9Y6L6 691 aa12.09□□□□□ -0.47
VRK1-204ENST00000555351 PCNX2A6NKB5 2137 aa12.08□□□□□ -0.47
VRK1-204ENST00000555351 A0A1W2PQJ5 194 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 A0A1W2PR77 199 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 LRRC53A6NM62 1247 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 FAM72CH0Y354 149 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 K7ERQ8 282 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 FGF10O15520 208 aaPredicted RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 CCP110O43303 1012 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 RAMP2O60895 175 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 RTN2O75298 545 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 ZNF821O75541 412 aaPredicted RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 SERPINC1P01008 464 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 CTSLP07711 333 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 GRK6P43250 576 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 ZNF135P52742 658 aaPredicted RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 ARF5P84085 180 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 FOXC1Q12948 553 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 ASIC2Q16515 512 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 RAB6CQ53S08 254 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 CARD16Q5EG05 197 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 FAM72AQ5TYM5 149 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 FAM72DQ6L9T8 149 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 RWDD4Q6NW29 188 aaKnown RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 DCUN1D2Q6PH85 259 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 RAB44Q7Z6P3 723 aaPredicted RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 PHLDB2Q86SQ0 1253 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 FAM72BQ86X60 149 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 DRC7Q8IY82 874 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 RTL3Q8N8U3 475 aaKnown RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 SYN2Q92777 582 aaPredicted RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 TRIM11Q96F44 468 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 SERAC1Q96JX3 654 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 SLC6A18Q96N87 628 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 NAP1L5Q96NT1 182 aaPredicted RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 MCEEQ96PE7 176 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 EPAS1Q99814 870 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 HEPHQ9BQS7 1158 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 RAB6CQ9H0N0 254 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 IL21RQ9HBE5 538 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 DYRK4Q9NR20 520 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 ARHGAP20Q9P2F6 1191 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 BZW2Q9Y6E2 419 aaKnown RBP12.08□□□□□ -0.48
VRK1-204ENST00000555351 ACACBO00763 2458 aa12.08□□□□□ -0.48
VRK1-204ENST00000555351 COL5A1P20908 1838 aaPredicted RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 A0A1B0GTQ1 180 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 SPAARA0A1B0GVQ0 90 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 PRAMEF26H0Y7S4 382 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 TLR4O00206 839 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 KPNA3O00505 521 aaPredicted RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 KDELR3O43731 214 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 AP1G1O43747 822 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 DKK1O94907 266 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 GJB6O95452 261 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 CD160O95971 181 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 GSRP00390 522 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 MYBL1P10243 752 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 GLDCP23378 1020 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 ITGB7P26010 798 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 METAP1P53582 386 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 TAS2R38P59533 333 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 RPL7AP62424 266 aaKnown RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 MAMLD1Q13495 774 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 ACAP1Q15027 740 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 POLD3Q15054 466 aaPredicted RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 PARP15Q460N3 678 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 INO80DQ53TQ3 878 aaPredicted RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 LINGO4Q6UY18 593 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 DPY19L3Q6ZPD9 716 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 ERN2Q76MJ5 926 aaKnown RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 TMC6Q7Z403 805 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 PSTKQ8IV42 348 aaKnown RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 UMODL1-AS1Q8N2C9 162 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 SETD7Q8WTS6 366 aaKnown RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 ADAMTS14Q8WXS8 1223 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 RAB7BQ96AH8 199 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 ELF4Q99607 663 aaPredicted RBP12.07□□□□□ -0.48
VRK1-204ENST00000555351 HAUS4Q9H6D7 363 aa12.07□□□□□ -0.48
VRK1-204ENST00000555351 CATSPERBQ9H7T0 1116 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms