RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CHMP24386 653 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 MT3P25713 68 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 DMWDQ09019 674 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 BECN1Q14457 450 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 KRT81Q14533 505 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 KRTAP27-1Q3LI81 207 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 ACSM6Q6P461 480 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 TMEM199Q8N511 208 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 ZBTB8BQ8NAP8 495 aaPredicted RBP5.69□□□□□ -1.5
VRK1-203ENST00000555067 KCNG4Q8TDN1 519 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 RNF125Q96EQ8 232 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 ZPBPQ9BS86 351 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 PIMREGQ9BSJ6 248 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 ARHGAP39Q9C0H5 1083 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 CDCP1Q9H5V8 836 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 ACAD9Q9H845 621 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 CFDP1Q9UEE9 299 aaPredicted RBP5.69□□□□□ -1.5
VRK1-203ENST00000555067 ADD3Q9UEY8 706 aaKnown RBP5.69□□□□□ -1.5
VRK1-203ENST00000555067 H7C0S8 307 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 GTPBP1O00178 669 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 DHX16O60231 1041 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 KRT38O76015 456 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 MTA2O94776 668 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 ADRB2P07550 413 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 CSF1P09603 554 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 PECAM1P16284 738 aaPredicted RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 PORP16435 677 aaPredicted RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 ABCD3P28288 659 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 CTNNA1P35221 906 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 GSTM5P46439 218 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 PPATQ06203 517 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 HYAL1Q12794 435 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 CDC16Q13042 620 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 PTGR1Q14914 329 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 RILPL1Q5EBL4 403 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 HECTD3Q5T447 861 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 SNX30Q5VWJ9 437 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 ATG16L1Q676U5 607 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 CCDC144NLQ6NUI1 221 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 SLC30A6Q6NXT4 461 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 KYAT3Q6YP21 454 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 Q6ZTC4 211 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 TMTC3Q6ZXV5 915 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 USP43Q70EL4 1123 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 ANKS1BQ7Z6G8 1248 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 RHPN2Q8IUC4 686 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 CCDC28AQ8IWP9 274 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 LAS2Q8IYD9 372 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 TMEM57Q8N5G2 664 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 RSPH1Q8WYR4 309 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 NSUN4Q96CB9 384 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 MSI2Q96DH6 328 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 VMP1Q96GC9 406 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 EIF3CQ99613 913 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 REEP2Q9BRK0 252 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 TXLNGYQ9BZA5 131 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 TP63Q9H3D4 680 aaPredicted RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 ABHD16BQ9H3Z7 469 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 EPS8L2Q9H6S3 715 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 CHODLQ9H9P2 273 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 SELENONQ9NZV5 590 aa5.68□□□□□ -1.5
VRK1-203ENST00000555067 ISY1Q9ULR0 285 aaKnown RBP5.68□□□□□ -1.5
VRK1-203ENST00000555067 A0A1W2PPC1 479 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 OR2W5A6NFC9 320 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 ZSCAN9O15535 394 aaPredicted RBP5.67□□□□□ -1.5
VRK1-203ENST00000555067 ATG13O75143 517 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 APOA4P06727 396 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 HOXC13P31276 330 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 STAT6P42226 847 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 P2RX3P56373 397 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 IFI35P80217 286 aaPredicted RBP5.67□□□□□ -1.5
VRK1-203ENST00000555067 ZXDBP98169 803 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.67□□□□□ -1.5
VRK1-203ENST00000555067 ATP1A4Q13733 1029 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 SLC5A9Q2M3M2 681 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 SMTNL2Q2TAL5 461 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 ANXA2RQ3ZCQ2 193 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.67□□□□□ -1.5
VRK1-203ENST00000555067 SLC10A5Q5PT55 438 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 ATPAF1Q5TC12 328 aaPredicted RBP5.67□□□□□ -1.5
VRK1-203ENST00000555067 LIPMQ5VYY2 423 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 ISM2Q6H9L7 571 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 DHRS13Q6UX07 377 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 VSIG1Q86XK7 387 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 ARL14EPQ8N8R7 260 aaPredicted RBP5.67□□□□□ -1.5
VRK1-203ENST00000555067 TBC1D22AQ8WUA7 517 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 GOLGA1Q92805 767 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 NUDT22Q9BRQ3 303 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 WDR83Q9BRX9 315 aaKnown RBP5.67□□□□□ -1.5
VRK1-203ENST00000555067 ACAD8Q9UKU7 415 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 TBX20Q9UMR3 447 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 DAPP1Q9UN19 280 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 DTNAQ9Y4J8 743 aa5.67□□□□□ -1.5
VRK1-203ENST00000555067 RUSC2Q8N2Y8 1516 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 hCG_1807616A0A1W2PRN6 198 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 PRSS44E7EML9 344 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 E7EVH7 732 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 AP3D1O14617 1153 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 PCDH17O14917 1159 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 MLYCDO95822 493 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms