RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ELF1P32519 619 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 PTGS2P35354 604 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 BUD31P41223 144 aaPredicted RBP5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 COPAP53621 1224 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TUBA3CQ13748 450 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 GPATCH4Q5T3I0 446 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 DEPDC1Q5TB30 811 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TUBA3EQ6PEY2 450 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 SHC4Q6S5L8 630 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 CRTC1Q6UUV9 634 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 MFSD6Q6ZSS7 791 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 USP49Q70CQ1 688 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 CCDC186Q7Z3E2 898 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 GPR149Q86SP6 731 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 GLIS1Q8NBF1 620 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TOR1AIP2Q8NFQ8 470 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TRAPPC12Q8WVT3 735 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 USP13Q92995 863 aaPredicted RBP5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 CENPTQ96BT3 561 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 SNX27Q96L92 541 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TIGD1Q96MW7 591 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 OSBPL9Q96SU4 736 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 BPIFA3Q9BQP9 254 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 RIOK1Q9BRS2 568 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 FAM167BQ9BTA0 163 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 STK33Q9BYT3 514 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TRIM5Q9C035 493 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 KRT23Q9C075 422 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 AMBRA1Q9C0C7 1298 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 LMAN2LQ9H0V9 348 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 MAGEH1Q9H213 219 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TDRD3Q9H7E2 651 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 ZCCHC17Q9NP64 241 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TBCCD1Q9NVR7 557 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 ANO10Q9NW15 660 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 DKK2Q9UBU2 259 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 ZNF70Q9UC06 446 aaPredicted RBP5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 SSX2IPQ9Y2D8 614 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 TRIM17Q9Y577 477 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 SLC4A4Q9Y6R1 1079 aa5.55□□□□□ -1.52
MTHFD1-206ENST00000554353 UNC80Q8N2C7 3258 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 EYSQ5T1H1 3165 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 TCP10L2B9ZVM9 353 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 DYNC1I1O14576 645 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 IFIT3O14879 490 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 HNRNPDLO14979 420 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 PPM1DO15297 605 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 SKAP2O75563 359 aaPredicted RBP5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 PFKFB1P16118 471 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 GABRB3P28472 473 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 ADORA2AP29274 412 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 CASQ1P31415 396 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 GALNSP34059 522 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 ALDH9A1P49189 494 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 RCAN1P53805 252 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 KRTAP1-1Q07627 177 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 LRMPQ12912 555 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 FOXE3Q13461 319 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 TNFAIP1Q13829 316 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 PTPN14Q15678 1187 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 TAF12Q16514 161 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 ZNF750Q32MQ0 723 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 DPCR1Q3MIW9 517 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 RESP18Q5W5W9 173 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 SYNE3Q6ZMZ3 975 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 ATG16L2Q8NAA4 619 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 MIGA1Q8NAN2 632 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 PROKR1Q8TCW9 393 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 ZFPM2Q8WW38 1151 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 ASB10Q8WXI3 467 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 SH3KBP1Q96B97 665 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 OPTNQ96CV9 577 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 RSRC1Q96IZ7 334 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 RMDN3Q96TC7 470 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 GPR20Q99678 358 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 SORBS1Q9BX66 1292 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 TMEM39BQ9GZU3 492 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 DKK4Q9UBT3 224 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 XPO7Q9UIA9 1087 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 TUBE1Q9UJT0 475 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 TMEM98Q9Y2Y6 226 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 CDK5RAP2Q96SN8 1893 aa5.54□□□□□ -1.52
MTHFD1-206ENST00000554353 ZSWIM8A7E2V4 1837 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 PDS5AQ29RF7 1337 aaKnown RBP5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 CCDC69A6NI79 296 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 BTBD18B2RXH4 712 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 TISP43B9A030 160 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 B9A039 149 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 PEX11BO96011 259 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 MMP1P03956 469 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 POLBP06746 335 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 SLC3A2P08195 630 aaKnown RBP5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 HGFP14210 728 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 CNTFP26441 200 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 MARCKSP29966 332 aaPredicted RBP5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 PRKAR1BP31321 381 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 ATP6V1E1P36543 226 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 PDE6CP51160 858 aa5.53□□□□□ -1.52
MTHFD1-206ENST00000554353 ZNF132P52740 706 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms