RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SPHK2Q9NRA0 654 aa11.08□□□□□ -0.64
PABPN1-203ENST00000553960 RBM22Q9NW64 420 aaKnown RBP eCLIP11.08□□□□□ -0.64
PABPN1-203ENST00000553960 MOCS1Q9NZB8 636 aa11.08□□□□□ -0.64
PABPN1-203ENST00000553960 NINJ2Q9NZG7 142 aa11.08□□□□□ -0.64
PABPN1-203ENST00000553960 LGALS13Q9UHV8 139 aa11.08□□□□□ -0.64
PABPN1-203ENST00000553960 SLC24A2Q9UI40 661 aa11.08□□□□□ -0.64
PABPN1-203ENST00000553960 CDH7Q9ULB5 785 aa11.08□□□□□ -0.64
PABPN1-203ENST00000553960 PRRC2BQ5JSZ5 2229 aaKnown RBP11.08□□□□□ -0.64
PABPN1-203ENST00000553960 A0A087WUV0 522 aaPredicted RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 FAM237BA0A1B0GVD1 139 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 TCRBV7S3A2A0A539 114 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 DFFAO00273 331 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 TNRC18O15417 2968 aaPredicted RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CD160O95971 181 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 IVLP07476 585 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 RHOCP08134 193 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 C7P10643 843 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CEBPBP17676 345 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 FSHRP23945 695 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PRKCHP24723 683 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PSMB4P28070 264 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CA8P35219 290 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PHBP35232 272 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 MTHFRP42898 656 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 VPS41P49754 854 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 RPL26P61254 145 aaKnown RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CDH17Q12864 832 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 MSLNQ13421 630 aaPredicted RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 LAMB3Q13751 1172 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 LBRQ14739 615 aaKnown RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PDGFRLQ15198 375 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 FNBP1LQ5T0N5 605 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 STXBP5Q5T5C0 1151 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 DENND5AQ6IQ26 1287 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 RETSATQ6NUM9 610 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 TFAP2DQ7Z6R9 452 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PRUNE1Q86TP1 453 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PRPF39Q86UA1 669 aaKnown RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 GOLGA6L1Q8N7Z2 621 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 OR52K2Q8NGK3 314 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 OSCP1Q8WVF1 389 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 SUSD6Q92537 303 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 OXNAD1Q96HP4 312 aaPredicted RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CELF6Q96J87 481 aaKnown RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 FEM1CQ96JP0 617 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 ZIM3Q96PE6 472 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 FAM83CQ9BQN1 747 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CCDC77Q9BR77 488 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 MLPHQ9BV36 600 aaPredicted RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 KIFC1Q9BW19 673 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CEP44Q9C0F1 390 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 SP110Q9HB58 689 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 ABCB8Q9NUT2 735 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 SMPD4Q9NXE4 827 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 CLEC1BQ9P126 229 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 PRKAG3Q9UGI9 489 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 RSPH14Q9UHP6 348 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 RPL26L1Q9UNX3 145 aaKnown RBP11.07□□□□□ -0.64
PABPN1-203ENST00000553960 ACTL7BQ9Y614 415 aa11.07□□□□□ -0.64
PABPN1-203ENST00000553960 BRWD1Q9NSI6 2320 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 A0A0D9SEW6 157 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 A6NNZ2 444 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 HMGB1P1B2RPK0 211 aaPredicted RBP11.06□□□□□ -0.64
PABPN1-203ENST00000553960 GOLGA8KD6RF30 607 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 J3KR12 359 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 TIMM44O43615 452 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 CDH16O75309 829 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 MAP3K6O95382 1288 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 PRAMEF12O95522 483 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 SYF2O95926 243 aaKnown RBP11.06□□□□□ -0.64
PABPN1-203ENST00000553960 HLA-DQB2P05538 268 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 MMP2P08253 660 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 NFKB1P19838 968 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 HLA-DPA1P20036 260 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
PABPN1-203ENST00000553960 SLC18A1P54219 525 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 NRLP54845 237 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 ZNF844Q08AG5 666 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 SLC10A7Q0GE19 358 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 PDIA2Q13087 525 aaKnown RBP11.06□□□□□ -0.64
PABPN1-203ENST00000553960 NR1H3Q13133 447 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 E2F5Q15329 346 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 KYNUQ16719 465 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 PLEKHG6Q3KR16 790 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 MSS51Q4VC12 460 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 TCEAL5Q5H9L2 206 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 ATAT1Q5SQI0 421 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 ARHGAP36Q6ZRI8 547 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 NLRP9Q7RTR0 991 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 PDCD7Q8N8D1 485 aaKnown RBP11.06□□□□□ -0.64
PABPN1-203ENST00000553960 WFIKKN2Q8TEU8 576 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 PYROXD1Q8WU10 500 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 DEPDC1BQ8WUY9 529 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 FGF13Q92913 245 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 PABPC5Q96DU9 382 aaKnown RBP11.06□□□□□ -0.64
PABPN1-203ENST00000553960 SGSM3Q96HU1 749 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 RIPOR3Q96MK2 946 aa11.06□□□□□ -0.64
PABPN1-203ENST00000553960 NUDCD1Q96RS6 583 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms