RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SEL1LQ9UBV2 794 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 CDH22Q9UJ99 828 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 RAI2Q9Y5P3 530 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 EYA2O00167 538 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 LDB2O43679 373 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 NAGAP17050 411 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 RFC1P35251 1148 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-210ENST00000553693 SKIV2L2P42285 1042 aaKnown RBP4.27□□□□□ -1.73
SCFD1-210ENST00000553693 MCM2P49736 904 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 GALNT1Q10472 559 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-210ENST00000553693 PKP1Q13835 747 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 PLCB4Q15147 1175 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 MAP9Q49MG5 647 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 LIN54Q6MZP7 749 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 SERPINA11Q86U17 422 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 WDR5BQ86VZ2 330 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 NR2C2APQ86WQ0 139 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 FSIP1Q8NA03 581 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 TRAPPC9Q96Q05 1148 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 ABHD16BQ9H3Z7 469 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 UPB1Q9UBR1 384 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 KLQ9UEF7 1012 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 PLEKHB1Q9UF11 243 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-210ENST00000553693 MST1RQ04912 1400 aa4.27□□□□□ -1.73
SCFD1-210ENST00000553693 IFITM10A6NMD0 228 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 HSPB6O14558 160 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 SEPT4O43236 478 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 STRNO43815 780 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 KCNJ13O60928 360 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 SOX30O94993 753 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 TFRCP02786 760 aaKnown RBP4.26□□□□□ -1.73
SCFD1-210ENST00000553693 CHN1P15882 459 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 HTR3AP46098 478 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 KIF5AQ12840 1032 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 HDAC1Q13547 482 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-210ENST00000553693 BLMHQ13867 455 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 HNF4GQ14541 408 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 ZNF284Q2VY69 593 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 SYTL3Q4VX76 610 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 RUNDC3AQ59EK9 446 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 C9orf57Q5W0N0 161 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 SULT6B1Q6IMI4 303 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 SYNE3Q6ZMZ3 975 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 TMC8Q8IU68 726 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 BRSK2Q8IWQ3 736 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 CLIP4Q8N3C7 705 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 SCAIQ8N9R8 606 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 LMO3Q8TAP4 145 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 RTP4Q96DX8 246 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 LTV1Q96GA3 475 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-210ENST00000553693 CRB3Q9BUF7 120 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 PLSCR4Q9NRQ2 329 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 FBXO40Q9UH90 709 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 ICAM5Q9UMF0 924 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 DHDHQ9UQ10 334 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 RCE1Q9Y256 329 aa4.26□□□□□ -1.73
SCFD1-210ENST00000553693 ABHD14A-ACY1A0A1B0GW23 586 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 SMTNL1A8MU46 457 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 CLDN7O95471 211 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 YWHAQP27348 245 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 COMPP49747 757 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-210ENST00000553693 ZNF628Q5EBL2 1059 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 EFHC1Q5JVL4 640 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 TANGO2Q6ICL3 276 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 SPSB3Q6PJ21 355 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 H1FNTQ75WM6 255 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-210ENST00000553693 MON1BQ7L1V2 547 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 C16orf82Q7Z2V1 217 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 PATL1Q86TB9 770 aaKnown RBP4.25□□□□□ -1.73
SCFD1-210ENST00000553693 CUZD1Q86UP6 607 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 MYLK4Q86YV6 388 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-210ENST00000553693 MIGA1Q8NAN2 632 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 STT3BQ8TCJ2 826 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 ACAD9Q9H845 621 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 KCND3Q9UK17 655 aa4.25□□□□□ -1.73
SCFD1-210ENST00000553693 EIF4G1Q04637 1599 aaKnown RBP4.24□□□□□ -1.73
SCFD1-210ENST00000553693 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 PLSCR5A0PG75 271 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 HMX3A6NHT5 357 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 H0Y3Z8 333 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 SLC16A5O15375 505 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 ITM2AO43736 263 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 LDB3O75112 727 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 SERPINI2O75830 405 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 CSTBP04080 98 aaKnown RBP4.24□□□□□ -1.73
SCFD1-210ENST00000553693 CYP21A2P08686 494 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 LYL1P12980 280 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 SERPINB3P29508 390 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 THPOP40225 353 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 PNPLA4P41247 253 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 GPR12P47775 334 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 FOXO1Q12778 655 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 PDCLQ13371 301 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 THOC5Q13769 683 aaKnown RBP4.24□□□□□ -1.73
SCFD1-210ENST00000553693 PRSS57Q6UWY2 283 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 RRAGAQ7L523 313 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 TEX45Q8NA69 505 aa4.24□□□□□ -1.73
SCFD1-210ENST00000553693 OTUD7AQ8TE49 926 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-210ENST00000553693 DNASE2BQ8WZ79 361 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms