RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FARP1Q9Y4F1 1045 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 ENTPD2Q9Y5L3 495 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 HS3ST4Q9Y661 456 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 ATMQ13315 3056 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 CDRT15L2A8MXV6 281 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 THAP12O43422 761 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 PAGE1O75459 146 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 CLDN11O75508 207 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 CNTN5O94779 1100 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 CSF2P04141 144 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 PRNPP04156 253 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 NME1P15531 152 aaKnown RBP9.29□□□□□ -0.92
SYNE2-209ENST00000553308 CDK17Q00537 523 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 KCNC4Q03721 635 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 NME3Q13232 169 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 CLN3Q13286 438 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 MAPK8IP2Q13387 824 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-209ENST00000553308 DEFB133Q30KQ1 61 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 ZSCAN23Q3MJ62 389 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 ALFQ53S48 1182 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 ARSIQ5FYB1 569 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 PERM1Q5SV97 790 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 TPRG1LQ5T0D9 272 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 C22orf39Q6P5X5 142 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 KYAT3Q6YP21 454 aaKnown RBP9.29□□□□□ -0.92
SYNE2-209ENST00000553308 ERN2Q76MJ5 926 aaKnown RBP9.29□□□□□ -0.92
SYNE2-209ENST00000553308 PRICKLE2Q7Z3G6 844 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 PARGQ86W56 976 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 TMIEQ8NEW7 156 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 CCDC114Q96M63 670 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 PPP1R9BQ96SB3 815 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 TNKS2Q9H2K2 1166 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 TBC1D30Q9Y2I9 924 aa9.29□□□□□ -0.92
SYNE2-209ENST00000553308 MYO18BQ8IUG5 2567 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 A0A0D9SEW6 157 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 SPTY2D1-AS1A0A0U1RR47 76 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 EME2A4GXA9 379 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 H3BM21 787 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 I6L893 689 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 MUSKO15146 869 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 P4HA2O15460 535 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 SPINT1O43278 529 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 AQP9O43315 295 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 MED7O43513 233 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 HSF2BPO75031 334 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 LEFTY1O75610 366 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 ENDOD1O94919 500 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 WISP1O95388 367 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 PAK4O96013 591 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 RHOCP08134 193 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CD44P16070 742 aaKnown RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 GNA15P30679 374 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 NEK3P51956 506 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 PDX1P52945 283 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CDH4P55283 916 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 KRT83P78385 493 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 C1QBPQ07021 282 aaKnown RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CCDC15Q0P6D6 951 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CETN1Q12798 172 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 NFATC3Q12968 1075 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 MEA1Q16626 185 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 C5orf22Q49AR2 442 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 OTUD1Q5VV17 481 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CCDC81Q6ZN84 652 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 RBM44Q6ZP01 1051 aaKnown RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 DPY19L3Q6ZPD9 716 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 FAM183BPQ6ZVS7 135 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CLEC14AQ86T13 490 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 DCP2Q8IU60 420 aaKnown RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 RBFAQ8N0V3 343 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 DCAF4L2Q8NA75 395 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 EHBP1Q8NDI1 1231 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 LMX1AQ8TE12 382 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF606Q8WXB4 792 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CCDC97Q96F63 343 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CCDC34Q96HJ3 373 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CEP63Q96MT8 703 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 GSDMAQ96QA5 445 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CPXM1Q96SM3 734 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 C2orf49Q9BVC5 232 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 HDAC8Q9BY41 377 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 SLC17A9Q9BYT1 436 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 GTPBP4Q9BZE4 634 aaKnown RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 TRIM4Q9C037 500 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 INTS2Q9H0H0 1204 aaKnown RBP9.28□□□□□ -0.92
SYNE2-209ENST00000553308 SIK2Q9H0K1 926 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 ANLNQ9NQW6 1124 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 IL36AQ9UHA7 158 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 PCDHGA8Q9Y5G5 932 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 SNX10Q9Y5X0 201 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 HS3ST3A1Q9Y663 406 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 CSNK1G3Q9Y6M4 447 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
SYNE2-209ENST00000553308 TRPM6Q9BX84 2022 aa9.27□□□□□ -0.92
SYNE2-209ENST00000553308 M0QYT0 321 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 PSMA7O14818 248 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 ZNF821O75541 412 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-209ENST00000553308 DAB1O75553 588 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 TNFSF15O95150 251 aa9.27□□□□□ -0.93
SYNE2-209ENST00000553308 ADCY5O95622 1261 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms