RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 HIVEP1P15822 2718 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 MED13LQ71F56 2210 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 SEC16AO15027 2179 aa5.56□□□□□ -1.52
HOXB3-213ENST00000552000 UBE4BO95155 1302 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 EDDM13A0A1B0GTR0 161 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 GOLGA6L7A0A1B0GV03 622 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 TARSL2A2RTX5 802 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 LRRIQ3A6PVS8 624 aaPredicted RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 TGFB1I1O43294 461 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 RTN2O75298 545 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 PPFIA2O75334 1257 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 NEBLO76041 1014 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 IL1BP01584 269 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 C4BPAP04003 597 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ASLP04424 464 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 GP1BAP07359 652 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 THEGLP0DJG4 465 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 GIMD1P0DJR0 217 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ALPPL2P10696 532 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 PRLRP16471 622 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 TRIM21P19474 475 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 DRD3P35462 400 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 STAT6P42226 847 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ASPAP45381 313 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 METAP1P53582 386 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF445P59923 1031 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 PSMA6P60900 246 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 YWHAGP61981 247 aaKnown RBP eCLIP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 TGIF1Q15583 401 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 IGFBP7Q16270 282 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 CDKN3Q16667 212 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 SKIDA1Q1XH10 827 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF542PQ5EBM4 170 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ADGRF1Q5T601 910 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 CRTC1Q6UUV9 634 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 CCDC73Q6ZRK6 1079 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 EFL1Q7Z2Z2 1120 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 CLEC14AQ86T13 490 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 PTRH1Q86Y79 214 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 MFN1Q8IWA4 741 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 NELFCDQ8IXH7 590 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ARHGAP18Q8N392 663 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ARL14Q8N4G2 192 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 WDR36Q8NI36 951 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 NDRG1Q92597 394 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 KLK6Q92876 244 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 LMLNQ96KR4 655 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 MRGPRX3Q96LB0 322 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 DUSP16Q9BY84 665 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 PHACTR1Q9C0D0 580 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 KCNK4Q9NYG8 393 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 NLGN3Q9NZ94 848 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 TJP2Q9UDY2 1190 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 SFMBT1Q9UHJ3 866 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 CYTH4Q9UIA0 394 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 SLCO3A1Q9UIG8 710 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 INTS6Q9UL03 887 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ERVW-1Q9UQF0 538 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 DMTF1Q9Y222 760 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 HBS1LQ9Y450 684 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 PCDHGA8Q9Y5G5 932 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ENTPD2Q9Y5L3 495 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 TACC2O95359 2948 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 MDC1Q14676 2089 aaKnown RBP5.55□□□□□ -1.52
HOXB3-213ENST00000552000 ADGRG4Q8IZF6 3080 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 CSMD1Q96PZ7 3565 aa5.55□□□□□ -1.52
HOXB3-213ENST00000552000 OTOGQ6ZRI0 2925 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 A0A087X0B3 334 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 BLACEA4D250 179 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CLEC18AA5D8T8 446 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 NEMP2A6NFY4 417 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 PRAMEF26H0Y7S4 382 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 K7ESM1 405 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SCAMP1O15126 338 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CASC3O15234 703 aaKnown RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 EIF3DO15371 548 aaKnown RBP eCLIP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SLC31A1O15431 190 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 MSI1O43347 362 aaKnown RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 LZTS3O60299 673 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 EXOC3O60645 756 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 ASS1P00966 412 aaKnown RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 HLA-DRAP01903 254 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SFTPCP11686 197 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 VAV1P15498 845 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 CD58P19256 250 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 C5AR1P21730 350 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 MZF1P28698 734 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 GJB2P29033 226 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SLC5A2P31639 672 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 NUDT1P36639 197 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 AFMP43652 599 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 NUMBP49757 651 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 STK19P49842 368 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 AP3M2P53677 418 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 RPS24P62847 133 aaKnown RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 ZNF177Q13360 481 aaPredicted RBP5.54□□□□□ -1.52
HOXB3-213ENST00000552000 SERINC3Q13530 473 aa5.54□□□□□ -1.52
HOXB3-213ENST00000552000 DRAP1Q14919 205 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms