RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 RAD9BQ6WBX8 426 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 DSG4Q86SJ6 1040 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 ZNF354CQ86Y25 554 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 TMEM139Q8IV31 216 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 MAP7D3Q8IWC1 876 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 FAM71BQ8TC56 605 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 PTPRN2Q92932 1015 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 CEP44Q9C0F1 390 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 SLC6A17Q9H1V8 727 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 MTG2Q9H4K7 406 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 NOL6Q9H6R4 1146 aaKnown RBP17.69■□□□□ 0.42
CDK4-208ENST00000551706 PCDH18Q9HCL0 1135 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 ITM2CQ9NQX7 267 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 USP36Q9P275 1121 aaKnown RBP17.69■□□□□ 0.42
CDK4-208ENST00000551706 WASF3Q9UPY6 502 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 FARP1Q9Y4F1 1045 aaPredicted RBP17.69■□□□□ 0.42
CDK4-208ENST00000551706 AKAP13Q12802 2813 aa17.69■□□□□ 0.42
CDK4-208ENST00000551706 SPAG17Q6Q759 2223 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 RASA4BC9J798 803 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 ALOX15BO15296 676 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 MAP3K13O43283 966 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 RASA4O43374 803 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 KDELR3O43731 214 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 MT-CO1P00395 513 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 GLDCP23378 1020 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 SERPINH1P50454 418 aaKnown RBP17.68■□□□□ 0.42
CDK4-208ENST00000551706 CDH6P55285 790 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 TAS2R40P59535 323 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 RPS14P62263 151 aaKnown RBP17.68■□□□□ 0.42
CDK4-208ENST00000551706 PDK2Q15119 407 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 PLK5Q496M5 336 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 SPDYCQ5MJ68 293 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 LINGO4Q6UY18 593 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 KBTBD6Q86V97 674 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 CASKIN2Q8WXE0 1202 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 RLN3Q8WXF3 142 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 OR8D1Q8WZ84 308 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 HMCESQ96FZ2 354 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 CSPG4P5Q96PW8 444 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 SMOC1Q9H4F8 434 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 LRRC19Q9H756 370 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 INVSQ9Y283 1065 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 PCDHGA5Q9Y5G8 931 aa17.68■□□□□ 0.42
CDK4-208ENST00000551706 CKAP5Q14008 2032 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 IGHV1OR15-9A0A0B4J2B8 117 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 ARHGAP42A6NI28 874 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 GIPC1O14908 333 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 DCLK1O15075 740 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 IGLV3-19P01714 112 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 SERPINB6P35237 376 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 GJC1P36383 396 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 RECQLP46063 649 aaPredicted RBP17.67■□□□□ 0.42
CDK4-208ENST00000551706 TPMTP51580 245 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 VAV2P52735 878 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 SERINC3Q13530 473 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 ZFYVE27Q5T4F4 411 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 LRRC38Q5VT99 294 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 TMCO3Q6UWJ1 677 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 Q6ZVU0 165 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 LPCAT2Q7L5N7 544 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 KIAA1328Q86T90 577 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 STK40Q8N2I9 435 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 PCDH20Q8N6Y1 951 aaKnown RBP17.67■□□□□ 0.42
CDK4-208ENST00000551706 KCTD6Q8NC69 237 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 CCDC112Q8NEF3 446 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 ZCCHC14Q8WYQ9 949 aaKnown RBP17.67■□□□□ 0.42
CDK4-208ENST00000551706 TSC1Q92574 1164 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 GATA6Q92908 595 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 ISG20Q96AZ6 181 aaKnown RBP17.67■□□□□ 0.42
CDK4-208ENST00000551706 ZNF670Q9BS34 389 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 VPS45Q9NRW7 570 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 CYP8B1Q9UNU6 501 aa17.67■□□□□ 0.42
CDK4-208ENST00000551706 DMXL2Q8TDJ6 3036 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 BTNL10A8MVZ5 291 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 K7ERQ8 282 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 MCF2LO15068 1137 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 SPOPO43791 374 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 ADH1BP00325 375 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 VAV1P15498 845 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 CD6P30203 668 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 MPLP40238 635 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 ARSEP51690 589 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 CST6Q15828 149 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 FAM46CQ5VWP2 391 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 AFMIDQ63HM1 303 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 PMS2CLQ68D20 193 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 C22orf39Q6P5X5 142 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 CACUL1Q86Y37 369 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 CPNE8Q86YQ8 564 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 MMAAQ8IVH4 418 aaKnown RBP17.66■□□□□ 0.42
CDK4-208ENST00000551706 RHOT1Q8IXI2 618 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 FAM129BQ96TA1 746 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 CALN1Q9BXU9 219 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 DUSP15Q9H1R2 295 aaPredicted RBP17.66■□□□□ 0.42
CDK4-208ENST00000551706 MBD1Q9UIS9 605 aaPredicted RBP17.66■□□□□ 0.42
CDK4-208ENST00000551706 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
CDK4-208ENST00000551706 REXO2Q9Y3B8 237 aaKnown RBP17.66■□□□□ 0.42
CDK4-208ENST00000551706 ITPR1Q14643 2758 aa17.65■□□□□ 0.42
CDK4-208ENST00000551706 C1QTNF3-AMACRE9PGA6 284 aa17.65■□□□□ 0.42
CDK4-208ENST00000551706 PJA2O43164 708 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms