RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZDHHC9Q9Y397 364 aa8.71□□□□□ -1.02
TROAP-208ENST00000548817 ITIH6Q6UXX5 1313 aa8.71□□□□□ -1.02
TROAP-208ENST00000548817 OTOGQ6ZRI0 2925 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 SYNJ2BP-COX16A0A087WUM0 186 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 TCAF2A6NFQ2 919 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 NEMP2A6NFY4 417 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 KCNU1A8MYU2 1149 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 THAP12O43422 761 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 BNIP3LO60238 219 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 NOBOXO60393 691 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 RNGTTO60942 597 aaKnown RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 SDC3O75056 442 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 GABBR2O75899 941 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 LETM1O95202 739 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 FGFR1OPO95684 399 aaKnown RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 CALCAP01258 141 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 FYNP06241 537 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 LIPCP11150 499 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 MZF1P28698 734 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 MAT2AP31153 395 aaKnown RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 CCR1P32246 355 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 USP8P40818 1118 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 GPD2P43304 727 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 STK19P49842 368 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 PMS1P54277 932 aaKnown RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 ZNF177Q13360 481 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 IGFBP7Q16270 282 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 MEA1Q16626 185 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 SYPL2Q5VXT5 272 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 CRYBG3Q68DQ2 2970 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 ISM2Q6H9L7 571 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 TMC6Q7Z403 805 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 TICAM1Q8IUC6 712 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 CCAR2Q8N163 923 aaKnown RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 AADATQ8N5Z0 425 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 ERCC4Q92889 916 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 PTPRN2Q92932 1015 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 KAT5Q92993 513 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 IFT43Q96FT9 208 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 KLHDC7BQ96G42 594 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 FAM81BQ96LP2 452 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 APOLD1Q96LR9 279 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 CCDC114Q96M63 670 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 TIGD1Q96MW7 591 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 RPRD1AQ96P16 312 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 NOX5Q96PH1 765 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 PHF12Q96QT6 1004 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 ZSWIM1Q9BR11 485 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 FUCA2Q9BTY2 467 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 THAP9Q9H5L6 903 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 UBE2TQ9NPD8 197 aaPredicted RBP8.7□□□□□ -1.02
TROAP-208ENST00000548817 DYRK4Q9NR20 520 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 COX16Q9P0S2 106 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 SEPT10Q9P0V9 454 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 CYTH4Q9UIA0 394 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 VPS28Q9UK41 221 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
TROAP-208ENST00000548817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.7□□□□□ -1.02
TROAP-208ENST00000548817 E5RJQ4 531 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 PRAMEF26H0Y7S4 382 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 ALOX15BO15296 676 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 RTN2O75298 545 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 GIMD1P0DJR0 217 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 GNA15P30679 374 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 CD97P48960 835 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 RPL34P49207 117 aaKnown RBP8.69□□□□□ -1.02
TROAP-208ENST00000548817 PLK1P53350 603 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 KRT83P78385 493 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 BECN1Q14457 450 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 DLG2Q15700 870 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 EFHC1Q5JVL4 640 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 ZCCHC8Q6NZY4 707 aaKnown RBP8.69□□□□□ -1.02
TROAP-208ENST00000548817 DENND1BQ6P3S1 775 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 ENOSF1Q7L5Y1 443 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 CREBRFQ8IUR6 639 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 ARHGEF19Q8IW93 802 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 IFI44Q8TCB0 444 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 NELFBQ8WX92 580 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 ZNF606Q8WXB4 792 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 MYEOVQ96EZ4 313 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 SRRTQ9BXP5 876 aaKnown RBP8.69□□□□□ -1.02
TROAP-208ENST00000548817 SLC4A5Q9BY07 1137 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 INTS2Q9H0H0 1204 aaKnown RBP8.69□□□□□ -1.02
TROAP-208ENST00000548817 MUC3BQ9H195 1237 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 SYNCQ9H7C4 482 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 DDIT4Q9NX09 232 aa8.69□□□□□ -1.02
TROAP-208ENST00000548817 XPO7Q9UIA9 1087 aaKnown RBP8.69□□□□□ -1.02
TROAP-208ENST00000548817 NF1P21359 2839 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 LRRK1Q38SD2 2015 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 KIF26BQ2KJY2 2108 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 LY6G6EA0A0G2JKS1 128 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 TMX2-CTNND1H3BSU7 103 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 PLD2O14939 933 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 SCAMP1O15126 338 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 FFAR2O15552 330 aa8.68□□□□□ -1.02
TROAP-208ENST00000548817 PLRG1O43660 514 aaKnown RBP8.68□□□□□ -1.02
TROAP-208ENST00000548817 HSF2BPO75031 334 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms