RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PRNPP04156 253 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 PRLRP16471 622 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 CHRNB2P17787 502 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 MMP8P22894 467 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 SERPINH1P50454 418 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 ARF5P84085 180 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 BNIP3Q12983 259 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 MANEALQ5VSG8 457 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 FAM207AQ9NSI2 230 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 LMBRD1Q9NUN5 540 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 NEU3Q9UQ49 428 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 FARP1Q9Y4F1 1045 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 WASF2Q9Y6W5 498 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 A0A1W2PQU0 124 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 RFPL3O75679 317 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 LDOC1O95751 146 aaPredicted RBP17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 SOX5P35711 763 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 POLR2FP61218 127 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 ATP11AP98196 1134 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 GNA12Q03113 381 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 ZNF284Q2VY69 593 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 NEK5Q6P3R8 708 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 DPY19L3Q6ZPD9 716 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 RBM43Q6ZSC3 357 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 HORMAD1Q86X24 394 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 TSC1Q92574 1164 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 MYOCQ99972 504 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 C11orf70Q9BRQ4 267 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 CEP44Q9C0F1 390 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 VPS16Q9H269 839 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 ATP13A1Q9HD20 1204 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 PPARGC1AQ9UBK2 798 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 IL36AQ9UHA7 158 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 SIK3Q9Y2K2 1263 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 RAXQ9Y2V3 346 aa17.77■□□□□ 0.44
CHMP1A-205ENST00000548650 ATRXP46100 2492 aa17.77■□□□□ 0.43
CHMP1A-205ENST00000548650 TRABD2BA6NFA1 517 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 MAGEC1O60732 1142 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 CLDN6P56747 220 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 NRG1Q02297 640 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 PTP4A2Q12974 167 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 STAT4Q14765 748 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 CDO1Q16878 200 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 C15orf59Q2T9L4 293 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 RETSATQ6NUM9 610 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 ERN2Q76MJ5 926 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 TMPRSS12Q86WS5 348 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 JOSD2Q8TAC2 188 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 SPON2Q9BUD6 331 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 HDAC8Q9BY41 377 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 FZD3Q9NPG1 666 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 NLRC4Q9NPP4 1024 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 DYRK4Q9NR20 520 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 NBEAQ8NFP9 2946 aa17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 TDRD6O60522 2096 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-205ENST00000548650 C2CD4BA6NLJ0 364 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 SLC31A1O15431 190 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 SDC3O75056 442 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 LEFTY1O75610 366 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 GJB6O95452 261 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 CD160O95971 181 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 C1SP09871 688 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 SDC4P31431 198 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 PTPN9P43378 593 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 RECQLP46063 649 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 GSCP56915 257 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 CCDC14Q49A88 953 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 TMEM259Q4ZIN3 620 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 ARSIQ5FYB1 569 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 FKBP15Q5T1M5 1219 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 SEL1L3Q68CR1 1132 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 TRIM72Q6ZMU5 477 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 GCNT7Q6ZNI0 430 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 NLRP14Q86W24 1093 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 PCDH20Q8N6Y1 951 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 SLC30A5Q8TAD4 765 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 GPT2Q8TD30 523 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 RXFP2Q8WXD0 754 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 KLK6Q92876 244 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 PPP1R16AQ96I34 528 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 NDFIP2Q9NV92 336 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 ZFR2Q9UPR6 939 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 FCF1Q9Y324 198 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 DAAM1Q9Y4D1 1078 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 ACTL7AQ9Y615 435 aa17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 URB1O60287 2271 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-205ENST00000548650 THEGLP0DJG4 465 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 UNGP13051 313 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 HOXB3P14651 431 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 HNRNPA2B1P22626 353 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 ITGB7P26010 798 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 ADRA1BP35368 520 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 ACVRL1P37023 503 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 CCNHP51946 323 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 NEK3P51956 506 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 CYP4F3Q08477 520 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 CCDC15Q0P6D6 951 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 PROX2Q3B8N5 592 aa17.74■□□□□ 0.43
CHMP1A-205ENST00000548650 STRADAQ7RTN6 431 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms