RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 RTKNQ9BST9 563 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 MLXIPQ9HAP2 919 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 SERHLQ9NQF3 203 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 COL20A1Q9P218 1284 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 SLC17A6Q9P2U8 582 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 GMEB2Q9UKD1 530 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 DUSP12Q9UNI6 340 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 MRPS17Q9Y2R5 130 aaKnown RBP4.72□□□□□ -1.65
CBX5-203ENST00000547872 SNX13Q9Y5W8 968 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 BAHCC1Q9P281 2608 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 ZBED9Q6R2W3 1325 aa4.72□□□□□ -1.65
CBX5-203ENST00000547872 SPTBN4Q9H254 2564 aa4.71□□□□□ -1.65
CBX5-203ENST00000547872 LINC00473A8K010 186 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 VWC2LB2RUY7 222 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 B4DLN1 442 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 HAS3O00219 553 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 MGST3O14880 152 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 CHRNA1P02708 482 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 SCG2P13521 617 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 TRIM27P14373 513 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 EPCAMP16422 314 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 NDUFB7P17568 137 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 UBA1P22314 1058 aaKnown RBP4.71□□□□□ -1.66
CBX5-203ENST00000547872 ALDH9A1P49189 494 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 METAP2P50579 478 aaKnown RBP eCLIP4.71□□□□□ -1.66
CBX5-203ENST00000547872 PDE6CP51160 858 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 DGKEP52429 567 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 MRPL12P52815 198 aaKnown RBP4.71□□□□□ -1.66
CBX5-203ENST00000547872 HLTFQ14527 1009 aaKnown RBP eCLIP4.71□□□□□ -1.66
CBX5-203ENST00000547872 STXBP2Q15833 593 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 CDC37Q16543 378 aaPredicted RBP4.71□□□□□ -1.66
CBX5-203ENST00000547872 INSCQ1MX18 579 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 FAM153CQ494X1 144 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 COBLL1Q53SF7 1204 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 IL31Q6EBC2 164 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 GET4Q7L5D6 327 aaPredicted RBP4.71□□□□□ -1.66
CBX5-203ENST00000547872 ZNF551Q7Z340 670 aaPredicted RBP4.71□□□□□ -1.66
CBX5-203ENST00000547872 DTX2Q86UW9 622 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 MICU3Q86XE3 530 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 COLGALT1Q8NBJ5 622 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 SUMF1Q8NBK3 374 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 OR56A3Q8NH54 315 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 BPIFB1Q8TDL5 484 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 ATP8B4Q8TF62 1192 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 ATG4AQ8WYN0 398 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 CASP10Q92851 521 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 CDCA3Q99618 268 aaPredicted RBP4.71□□□□□ -1.66
CBX5-203ENST00000547872 BTBD1Q9H0C5 482 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 CXorf36Q9H7Y0 433 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 SYNPO2LQ9H987 977 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 GLOD4Q9HC38 313 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 SSX2IPQ9Y2D8 614 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 VPS13AQ96RL7 3174 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 DENND4AQ7Z401 1863 aa4.71□□□□□ -1.66
CBX5-203ENST00000547872 PATJQ8NI35 1801 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 LOC102723971A0A1B0GUV8 181 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 DENND3A2RUS2 1198 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 RHPN2P1A8MT19 583 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 GCOM1H8Y6P7 765 aaPredicted RBP4.7□□□□□ -1.66
CBX5-203ENST00000547872 M0QZ92 97 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 GPAA1O43292 621 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 PPFIA2O75334 1257 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 EBLN1P0CF75 366 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 STAG3L1P0CL83 205 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 GLULP15104 373 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 CD72P21854 359 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 HOXA13P31271 388 aaPredicted RBP4.7□□□□□ -1.66
CBX5-203ENST00000547872 MTHFRP42898 656 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 CLCN2P51788 898 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 CACNA2D1P54289 1103 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 SP2Q02086 613 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 SAFBQ15424 915 aaKnown RBP eCLIP4.7□□□□□ -1.66
CBX5-203ENST00000547872 ZIK1Q3SY52 487 aaPredicted RBP4.7□□□□□ -1.66
CBX5-203ENST00000547872 AASDHQ4L235 1098 aaPredicted RBP4.7□□□□□ -1.66
CBX5-203ENST00000547872 TSTD2Q5T7W7 516 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 DEPDC1Q5TB30 811 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 N4BP2L1Q5TBK1 243 aaPredicted RBP4.7□□□□□ -1.66
CBX5-203ENST00000547872 CACHD1Q5VU97 1274 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 ZDHHC24Q6UX98 284 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 MAVSQ7Z434 540 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 FTSJ3Q8IY81 847 aaKnown RBP4.7□□□□□ -1.66
CBX5-203ENST00000547872 SPARTQ8N0X7 666 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 OSCP1Q8WVF1 389 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 IPCEF1Q8WWN9 437 aaPredicted RBP4.7□□□□□ -1.66
CBX5-203ENST00000547872 RFKQ969G6 155 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 NECTIN4Q96NY8 510 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 SARGQ9BW04 601 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 UBA5Q9GZZ9 404 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 NAPBQ9H115 298 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 VAT1LQ9HCJ6 419 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 PNPLA8Q9NP80 782 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 ARHGEF3Q9NR81 526 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 DKK3Q9UBP4 350 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 ITGB1BP2Q9UKP3 347 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 RAB23Q9ULC3 237 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 ST3GAL5Q9UNP4 418 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 CORO2BQ9UQ03 480 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 TBC1D30Q9Y2I9 924 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms