RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ADIGQ0VDE8 80 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 CDKL3Q8IVW4 592 aaPredicted RBP17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 SCUBE3Q8IX30 993 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 OTUD6BQ8N6M0 293 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 PLD5Q8N7P1 536 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 GLIS1Q8NBF1 620 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 UHMK1Q8TAS1 419 aaKnown RBP17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 PYROXD1Q8WU10 500 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 MAML1Q92585 1016 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 C9orf72Q96LT7 481 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 LRRC4CQ9HCJ2 640 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 PCDH18Q9HCL0 1135 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 POLR3BQ9NW08 1133 aaPredicted RBP17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 NKIRAS1Q9NYS0 192 aa17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 SMG5Q9UPR3 1016 aaKnown RBP17.67■□□□□ 0.42
RBFOX1-207ENST00000547338 FBXO21O94952 628 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 PAPSS2O95340 614 aaPredicted RBP17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 ZBED1O96006 694 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 GSTA2P09210 222 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 CD48P09326 243 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 IL4RP24394 825 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 ATP5C1P36542 298 aaKnown RBP17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 MAGEA6P43360 314 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 SLC6A11P48066 632 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 RGS7P49802 495 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 DMWDQ09019 674 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 PDIA2Q13087 525 aaKnown RBP17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 ITIH4Q14624 930 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 C10orf120Q5SQS8 335 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 LY6G5CQ5SRR4 150 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 TRNP1Q6NT89 227 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 Q6ZNB5 142 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 HTR3DQ70Z44 454 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 PHTF2Q8N3S3 785 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 SYNPOQ8N3V7 929 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 ZBTB44Q8NCP5 570 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 MDM1Q8TC05 714 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 SEC16BQ96JE7 1060 aa17.66■□□□□ 0.42
RBFOX1-207ENST00000547338 GOLGA6L7A0A1B0GV03 622 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 YJEFN3A6XGL0 299 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 HACD1B0YJ81 288 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 E7ENQ6 273 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 SLC9A3R1O14745 358 aaPredicted RBP17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 KLKB1P03952 638 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 ETS1P14921 441 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 BRAFP15056 766 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 MATKP42679 507 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 PSEN1P49768 467 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 YWHAGP61981 247 aaKnown RBP eCLIP17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 GRSF1Q12849 480 aaKnown RBP eCLIP17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 C15orf59Q2T9L4 293 aaPredicted RBP17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 EFHC2Q5JST6 749 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 SCYL2Q6P3W7 929 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 PIGWQ7Z7B1 504 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 UNC45BQ8IWX7 931 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 CCDC13Q8IYE1 715 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 ZBED8Q8IZ13 594 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 GRAMD1AQ96CP6 724 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 LRRC39Q96DD0 335 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 CABS1Q96KC9 395 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 FERMT1Q9BQL6 677 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 ACTR5Q9H9F9 607 aaPredicted RBP17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 TMEM51Q9NW97 253 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 RRN3Q9NYV6 651 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 DNMT3LQ9UJW3 386 aa17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 PTPRZ1P23471 2315 aaPredicted RBP17.65■□□□□ 0.42
RBFOX1-207ENST00000547338 TMEM120BA0PK00 339 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 H7C0C1 242 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 LILRB5O75023 590 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 STC2O76061 302 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 NOS2P35228 1153 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 ATP5OP48047 213 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 ZNF135P52742 658 aaPredicted RBP17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 HDAC4P56524 1084 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 GEMIN4P57678 1058 aaKnown RBP17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 KCTD19Q17RG1 926 aaPredicted RBP17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 SLC25A52Q3SY17 297 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 TMEM25Q86YD3 366 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 ETFBKMTQ8IXQ9 262 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 SCML4Q8N228 414 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 CCDC197Q8NCU1 140 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 CLEC4CQ8WTT0 213 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 DYDC1Q8WWB3 177 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 CKAP2Q8WWK9 683 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 ALKBH8Q96BT7 664 aaKnown RBP17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 OTUB2Q96DC9 234 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 SNRNP25Q9BV90 132 aaKnown RBP17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 NACA2Q9H009 215 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 USP29Q9HBJ7 922 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 SAMD15Q9P1V8 674 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 TBC1D14Q9P2M4 693 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 PSMC3IPQ9P2W1 217 aaPredicted RBP17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 STAP1Q9ULZ2 295 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 SH3BP1Q9Y3L3 701 aa17.64■□□□□ 0.41
RBFOX1-207ENST00000547338 K7EQS6 105 aa17.63■□□□□ 0.41
RBFOX1-207ENST00000547338 PIK3R2O00459 728 aa17.63■□□□□ 0.41
RBFOX1-207ENST00000547338 GFRA3O60609 400 aa17.63■□□□□ 0.41
RBFOX1-207ENST00000547338 DAB1O75553 588 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms