RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 WNT3AP56704 352 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 NFE2Q16621 373 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 TCTN1Q2MV58 587 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 TRIM71Q2Q1W2 868 aaKnown RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 ZNF789Q5FWF6 425 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 TRIM68Q6AZZ1 485 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 FUT10Q6P4F1 479 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.346e-16■■■■■ 50.6
SCAF11-209ENST00000547018 ARCQ7LC44 396 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 MON1AQ86VX9 555 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 DENND1CQ8IV53 801 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 ARHGAP12Q8IWW6 846 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 OR7D4Q8NG98 312 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 TSNARE1Q96NA8 513 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 GLOD4Q9HC38 313 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 PLK2Q9NYY3 685 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 ATP11BQ9Y2G3 1177 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 KCNU1A8MYU2 1149 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 RALBP11234 206 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 CPA3P15088 417 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 EPHB1P54762 984 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 SH2D5Q6ZV89 423 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 SNX31Q8N9S9 440 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 HDAC11Q96DB2 347 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 TDRD15B5MCY1 1934 aaKnown RBP12.92□□□□□ -0.34
SCAF11-209ENST00000547018 A8MX80 341 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 MAFKO60675 156 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 GJB5O95377 273 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 CHRNGP07510 517 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 SELPP16109 830 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 COG7P83436 770 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 MARC1Q5VT66 337 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 LINGO4Q6UY18 593 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 C4orf22Q6V702 233 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 SERPINB11Q96P15 392 aa12.92□□□□□ -0.34
SCAF11-209ENST00000547018 ZCWPW2A0A1B0GU75 182 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 TNFRSF10BO14763 440 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 DLDP09622 509 aaKnown RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 GLDCP23378 1020 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 SCNN1BP51168 640 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 NAGLUP54802 743 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 CDK16Q00536 496 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 CSHL1Q14406 222 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 TEDDM1Q5T9Z0 273 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 NSMCE1Q8WV22 266 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 KCNK13Q9HB14 408 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 UXTQ9UBK9 157 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 EMCNQ9ULC0 261 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 PRR5-ARHGAP8B1AHC4 643 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 ARVCFO00192 962 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 PLIN3O60664 434 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 AHSGP02765 367 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 SKIP12755 728 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 MLLT6P55198 1093 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 ARHGAP8P85298 464 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 POLD3Q15054 466 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 GALNTL6Q49A17 601 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 MS4A13Q5J8X5 152 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 LHX8Q68G74 356 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 EFHBQ8N7U6 833 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 OR6K2Q8NGY2 324 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 UTP4Q969X6 686 aaKnown RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 PHF21BQ96EK2 531 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 FAM161BQ96MY7 647 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 THTPAQ9BU02 230 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 PRUNE2Q8WUY3 3088 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 CBX4O00257 560 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 KIF3CO14782 793 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 NCAM2O15394 837 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 PRSS56P0CW18 603 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 CRHR1P34998 444 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 SEMG2Q02383 582 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 PLD1Q13393 1074 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 ICE2Q659A1 982 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 TREML1Q86YW5 311 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 BCL7CQ8WUZ0 217 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-209ENST00000547018 RMDN1Q96DB5 314 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 PNPLA8Q9NP80 782 aa12.91□□□□□ -0.34
SCAF11-209ENST00000547018 CYP11A1P05108 521 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 PRAMEP78395 509 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-209ENST00000547018 SPANXN3Q5MJ09 141 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 CNSTQ6PJW8 725 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 ATG14Q6ZNE5 492 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 RINLQ6ZS11 566 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 MTBPQ96DY7 904 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 TRHDEQ9UKU6 1024 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 UBA6A0AVT1 1052 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-209ENST00000547018 MTMR11A4FU01 709 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 RAMP2O60895 175 aa12.9□□□□□ -0.34
SCAF11-209ENST00000547018 GLRA3O75311 464 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms