RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PYCARDQ9ULZ3 195 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 PLXND1Q9Y4D7 1925 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 APOL1O14791 398 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 AXIN1O15169 862 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 KRT10P13645 584 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 IL10RBQ08334 325 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 GALNT2Q10471 571 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 SLC10A2Q12908 348 aaPredicted RBP20.86■□□□□ 0.93
HMGA2-211ENST00000545998 PPP2R5EQ16537 467 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 METTL3Q86U44 580 aaKnown RBP20.86■□□□□ 0.93
HMGA2-211ENST00000545998 LRRC49Q8IUZ0 686 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 CCDC50Q8IVM0 306 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 STK40Q8N2I9 435 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 PCDH20Q8N6Y1 951 aaKnown RBP20.86■□□□□ 0.93
HMGA2-211ENST00000545998 TRIM58Q8NG06 486 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 TPSD1Q9BZJ3 242 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 DTLQ9NZJ0 730 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 UBA2Q9UBT2 640 aaPredicted RBP20.86■□□□□ 0.93
HMGA2-211ENST00000545998 PCDHGA2Q9Y5H1 932 aa20.86■□□□□ 0.93
HMGA2-211ENST00000545998 ZBTB24O43167 697 aaPredicted RBP20.85■□□□□ 0.93
HMGA2-211ENST00000545998 MAFKO60675 156 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 TMCC1O94876 653 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 PYGMP11217 842 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 ADCY2Q08462 1091 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 TFDP2Q14188 446 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 ELAVL3Q14576 367 aaKnown RBP20.85■□□□□ 0.93
HMGA2-211ENST00000545998 LLGL1Q15334 1064 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 MEI1Q5TIA1 1274 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 KAZNQ674X7 775 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 PGBD3Q8N328 593 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 ATPAF2Q8N5M1 289 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 OR2A12Q8NGT7 310 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 TNKS2Q9H2K2 1166 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 SP110Q9HB58 689 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 MAP3K6O95382 1288 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 PEX11BO96011 259 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 PTPN7P35236 360 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 GARSP41250 739 aaKnown RBP20.85■□□□□ 0.93
HMGA2-211ENST00000545998 CYTH1Q15438 398 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 SIPA1Q96FS4 1042 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 IRF2BPLQ9H1B7 796 aa20.85■□□□□ 0.93
HMGA2-211ENST00000545998 TRMT1Q9NXH9 659 aaKnown RBP20.85■□□□□ 0.93
HMGA2-211ENST00000545998 SPAG17Q6Q759 2223 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 MCF2LO15068 1137 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 ALOX15BO15296 676 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 CST8O60676 142 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 RPS14P62263 151 aaKnown RBP20.84■□□□□ 0.93
HMGA2-211ENST00000545998 DYNLT1P63172 113 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 DCAF12L1Q5VU92 463 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 ZNF776Q68DI1 518 aaPredicted RBP20.84■□□□□ 0.93
HMGA2-211ENST00000545998 NPNTQ6UXI9 565 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 PLPP6Q8IY26 295 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 PRCCQ92733 491 aaPredicted RBP20.84■□□□□ 0.93
HMGA2-211ENST00000545998 CCDC114Q96M63 670 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 HERPUD2Q9BSE4 406 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 EFR3BQ9Y2G0 817 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 HEY1Q9Y5J3 304 aa20.84■□□□□ 0.93
HMGA2-211ENST00000545998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
HMGA2-211ENST00000545998 BNIP3LO60238 219 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 RNASEH1O60930 286 aaKnown RBP20.83■□□□□ 0.92
HMGA2-211ENST00000545998 LILRB5O75023 590 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 MX2P20592 715 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 RFTN1Q14699 578 aaPredicted RBP20.83■□□□□ 0.92
HMGA2-211ENST00000545998 CARD16Q5EG05 197 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 AADACL2Q6P093 401 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 KIAA1324Q6UXG2 1013 aaKnown RBP20.83■□□□□ 0.92
HMGA2-211ENST00000545998 DPY19L3Q6ZPD9 716 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 OR8D1Q8WZ84 308 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 ZNF599Q96NL3 588 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 TSGA13Q96PP4 275 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 HEMGNQ9BXL5 484 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 OSBPL8Q9BZF1 889 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 TM6SF2Q9BZW4 377 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 RAPGEFL1Q9UHV5 662 aa20.83■□□□□ 0.92
HMGA2-211ENST00000545998 USP27XA6NNY8 438 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 GSRP00390 522 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 TGM2P21980 687 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 RECQLP46063 649 aaPredicted RBP20.82■□□□□ 0.92
HMGA2-211ENST00000545998 DNA2P51530 1060 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 ZBTB16Q05516 673 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 TMCO4Q5TGY1 634 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 BBS12Q6ZW61 710 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 CACUL1Q86Y37 369 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 MMAAQ8IVH4 418 aaKnown RBP20.82■□□□□ 0.92
HMGA2-211ENST00000545998 CHST14Q8NCH0 376 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 FATE1Q969F0 183 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 HDAC11Q96DB2 347 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 OLFM3Q96PB7 478 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 USP36Q9P275 1121 aaKnown RBP20.82■□□□□ 0.92
HMGA2-211ENST00000545998 LHX3Q9UBR4 397 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 PPM1HQ9ULR3 514 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 FARP1Q9Y4F1 1045 aaPredicted RBP20.82■□□□□ 0.92
HMGA2-211ENST00000545998 ABCA7Q8IZY2 2146 aa20.82■□□□□ 0.92
HMGA2-211ENST00000545998 CTSLP07711 333 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 CNR2P34972 360 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 CETN2P41208 172 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 NR2C2P49116 596 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 RHOAP61586 193 aa20.81■□□□□ 0.92
HMGA2-211ENST00000545998 ZNF211Q13398 564 aaPredicted RBP20.81■□□□□ 0.92
HMGA2-211ENST00000545998 CST6Q15828 149 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms